RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 IGKV3D-20A0A0C4DH25 116 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 LINC01619G3V211 115 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 PRR9Q5T870 116 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 VAMP8Q9BV40 100 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 OVOL1O14753 267 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 RNASE1P07998 156 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 FAM104BQ5XKR9 115 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 ADAMTSL5Q6ZMM2 481 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 OR1N2Q8NGR9 330 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 DPF1Q92782 380 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 NDUFAF3Q9BU61 184 aa16.89■□□□□ 0.29
PDLIM2-202ENST00000308354 A0A1W2PRX2 142 aa16.88■□□□□ 0.29
PDLIM2-202ENST00000308354 MSRB1Q9NZV6 116 aa16.88■□□□□ 0.29
PDLIM2-202ENST00000308354 D6R8Y8 96 aa16.88■□□□□ 0.29
PDLIM2-202ENST00000308354 OR8A1Q8NGG7 326 aa16.88■□□□□ 0.29
PDLIM2-202ENST00000308354 ZNF418Q8TF45 676 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-202ENST00000308354 ZNF688P0C7X2 276 aa16.87■□□□□ 0.29
PDLIM2-202ENST00000308354 CD28P10747 220 aa16.87■□□□□ 0.29
PDLIM2-202ENST00000308354 LINC01006Q8NI28 216 aa16.87■□□□□ 0.29
PDLIM2-202ENST00000308354 PPP1R14DQ9NXH3 145 aa16.87■□□□□ 0.29
PDLIM2-202ENST00000308354 SCGB2A2Q13296 93 aa16.86■□□□□ 0.29
PDLIM2-202ENST00000308354 LINC00477Q96M19 166 aa16.86■□□□□ 0.29
PDLIM2-202ENST00000308354 CNFNQ9BYD5 112 aa16.86■□□□□ 0.29
PDLIM2-202ENST00000308354 ID1P41134 155 aa16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 HILS1P60008 231 aa16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 KIR3DS1Q14943 382 aa16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 MRPL51Q4U2R6 128 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 WFDC12Q8WWY7 111 aa16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 DLX4Q92988 240 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 TMEM160Q9NX00 188 aa16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 BTF3P20290 206 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 PSMG4Q5JS54 123 aa16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 LINC00173Q6ZV60 143 aa16.85■□□□□ 0.29
PDLIM2-202ENST00000308354 C20orf144Q9BQM9 153 aa16.84■□□□□ 0.29
PDLIM2-202ENST00000308354 U3KQK5 164 aa16.84■□□□□ 0.29
PDLIM2-202ENST00000308354 SORL1Q92673 2214 aa16.84■□□□□ 0.29
PDLIM2-202ENST00000308354 ATOH7Q8N100 152 aa16.84■□□□□ 0.29
PDLIM2-202ENST00000308354 ZFAND2AQ8N6M9 145 aa16.84■□□□□ 0.29
PDLIM2-202ENST00000308354 ORMDL3Q8N138 153 aa16.83■□□□□ 0.28
PDLIM2-202ENST00000308354 PRELID3AQ96N28 172 aa16.83■□□□□ 0.28
PDLIM2-202ENST00000308354 SPATA12Q7Z6I5 190 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 OR9G4Q8NGQ1 327 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 SMKR1H3BMG3 65 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 K7EQG2 157 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 LEPROTL1O95214 131 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 CITED2Q99967 270 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 TMEM191AQ9H0A3 160 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 AP5S1Q9NUS5 200 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 LENEPQ9Y5L5 61 aa16.82■□□□□ 0.28
PDLIM2-202ENST00000308354 SETXQ7Z333 2677 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-202ENST00000308354 PRSS3P2Q8NHM4 247 aa16.81■□□□□ 0.28
PDLIM2-202ENST00000308354 RAX2Q96IS3 184 aa16.81■□□□□ 0.28
PDLIM2-202ENST00000308354 LOC389332A0A1B0GUA5 103 aa16.81■□□□□ 0.28
PDLIM2-202ENST00000308354 IFI27P40305 119 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-202ENST00000308354 DMRTA1Q5VZB9 504 aa16.81■□□□□ 0.28
PDLIM2-202ENST00000308354 TMEM70Q9BUB7 260 aa16.81■□□□□ 0.28
PDLIM2-202ENST00000308354 WNK1Q9H4A3 2382 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 INAFM1C9JVW0 142 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 NCR2O95944 276 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 FA2HQ7L5A8 372 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 HIVEP1P15822 2718 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 CKS2P33552 79 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 RNASE4P34096 147 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 SNRPD3P62318 126 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 SPATA45Q537H7 98 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 OR10AG1Q8NH19 301 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 C16orf95Q9H693 158 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 SIGLEC8Q9NYZ4 499 aa16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 TIMM8BQ9Y5J9 83 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-202ENST00000308354 IGKV3-20P01619 116 aa16.79■□□□□ 0.28
PDLIM2-202ENST00000308354 RNF185Q96GF1 192 aa16.79■□□□□ 0.28
PDLIM2-202ENST00000308354 FAM19A4Q96LR4 140 aa16.79■□□□□ 0.28
PDLIM2-202ENST00000308354 PEMTQ9UBM1 199 aa16.79■□□□□ 0.28
PDLIM2-202ENST00000308354 MAJINQ3KP22 176 aa16.78■□□□□ 0.28
PDLIM2-202ENST00000308354 SAMD13Q5VXD3 122 aa16.78■□□□□ 0.28
PDLIM2-202ENST00000308354 RAB4AP20338 218 aa16.78■□□□□ 0.28
PDLIM2-202ENST00000308354 NPYP01303 97 aa16.77■□□□□ 0.28
PDLIM2-202ENST00000308354 OR5AL1P0C617 328 aa16.77■□□□□ 0.28
PDLIM2-202ENST00000308354 MIEN1Q9BRT3 115 aa16.77■□□□□ 0.28
PDLIM2-202ENST00000308354 FLNBO75369 2602 aaKnown RBP16.77■□□□□ 0.27
PDLIM2-202ENST00000308354 SYS1-DBNDD2H3BUS1 97 aa16.76■□□□□ 0.27
PDLIM2-202ENST00000308354 GAS8-AS1O95177 125 aa16.76■□□□□ 0.27
PDLIM2-202ENST00000308354 ZNF705AQ6ZN79 300 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-202ENST00000308354 AGRNO00468 2067 aa16.76■□□□□ 0.27
PDLIM2-202ENST00000308354 NSD1Q96L73 2696 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-202ENST00000308354 CRXO43186 299 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-202ENST00000308354 TMEM61Q8N0U2 210 aa16.76■□□□□ 0.27
PDLIM2-202ENST00000308354 H3BVH4 76 aa16.75■□□□□ 0.27
PDLIM2-202ENST00000308354 CCL24O00175 119 aa16.75■□□□□ 0.27
PDLIM2-202ENST00000308354 NIPBLQ6KC79 2804 aaeCLIP16.75■□□□□ 0.27
PDLIM2-202ENST00000308354 TRAV21A0A0B4J279 112 aa16.74■□□□□ 0.27
PDLIM2-202ENST00000308354 EREGO14944 169 aa16.74■□□□□ 0.27
PDLIM2-202ENST00000308354 A0A0J9YX75 114 aa16.74■□□□□ 0.27
PDLIM2-202ENST00000308354 EVI2AP22794 236 aa16.74■□□□□ 0.27
PDLIM2-202ENST00000308354 SPRY2O43597 315 aa16.73■□□□□ 0.27
PDLIM2-202ENST00000308354 DYNLRB2Q8TF09 96 aa16.73■□□□□ 0.27
PDLIM2-202ENST00000308354 HSPB8Q9UJY1 196 aa16.73■□□□□ 0.27
PDLIM2-202ENST00000308354 TSSC4Q9Y5U2 329 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-202ENST00000308354 A0A096LNJ9 63 aa16.73■□□□□ 0.27
PDLIM2-202ENST00000308354 SNAI2O43623 268 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms