RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 UBE2WQ96B02 151 aa4.14□□□□□ -1.75
USP8-201ENST00000307179 CFC1BP0CG36 223 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 CFC1P0CG37 223 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 MSRB1Q9NZV6 116 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 IGKV3D-20A0A0C4DH25 116 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 CDX4O14627 284 aaPredicted RBP4.13□□□□□ -1.75
USP8-201ENST00000307179 LGALS3P17931 250 aaKnown RBP4.13□□□□□ -1.75
USP8-201ENST00000307179 DYNAPQ8N1N2 210 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 RASL10AQ92737 203 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 IGHV4OR15-8A0A075B7B6 117 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 A0A087WW49 117 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 CNTFRP26992 372 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 PPIFP30405 207 aaKnown RBP4.13□□□□□ -1.75
USP8-201ENST00000307179 LINC01620Q4KN68 170 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 C9orf139Q6ZV77 190 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 ZNF784Q8NCA9 323 aaPredicted RBP4.13□□□□□ -1.75
USP8-201ENST00000307179 TMEM263Q8WUH6 116 aaKnown RBP4.13□□□□□ -1.75
USP8-201ENST00000307179 CTSZQ9UBR2 303 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 SMAD5-AS1Q9Y6J3 95 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 SDK1Q7Z5N4 2213 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 LGALS9O00182 355 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 IGHV3-33P01772 117 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 RHOHQ15669 191 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 Q8TAT8 98 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 FANCD2OSQ96PS1 177 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 VKORC1Q9BQB6 163 aa4.13□□□□□ -1.75
USP8-201ENST00000307179 TRAV21A0A0B4J279 112 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 M0R1W7 72 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 M0R2P5 195 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 TRGV3P03979 118 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 EFNA4P52798 201 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 ADIPOQQ15848 244 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 IGLV4-69A0A075B6H9 119 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 TRAV2A0A0B4J234 112 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 C9JAW5 83 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 F8W735 103 aaPredicted RBP4.12□□□□□ -1.75
USP8-201ENST00000307179 H3BVH4 76 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 OVOL1O14753 267 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 COX6CP09669 75 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 ZFP2Q6ZN57 461 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 SEM1Q6ZVN7 128 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 TMEM105Q8N8V8 129 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 FAM110DQ8TAY7 271 aaPredicted RBP4.12□□□□□ -1.75
USP8-201ENST00000307179 TMEM101Q96IK0 257 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 KNTC1P50748 2209 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 GATA1P15976 413 aaPredicted RBP4.12□□□□□ -1.75
USP8-201ENST00000307179 Q8N1Y9 231 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 DPM3Q9P2X0 92 aa4.12□□□□□ -1.75
USP8-201ENST00000307179 IGHV3-72A0A0B4J1Y9 119 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 TRBV6-5A0A0K0K1A5 114 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 GATA3P23771 443 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 EBI3Q14213 229 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 APRG1Q8IVJ8 170 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 MAFAQ8NHW3 353 aaPredicted RBP4.11□□□□□ -1.75
USP8-201ENST00000307179 YAE1D1Q9NRH1 226 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 A0A1B0GX51 115 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 PATE3B3GLJ2 98 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 J3QQQ9 107 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 VCYO14598 125 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 HERV-K104P63124 156 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 CCL8P80075 99 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 ZNF876PQ49A33 203 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 IGFL3Q6UXB1 125 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 C15orf53Q8NAA6 179 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 LY6G5BQ8NDX9 201 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 ZFAND3Q9H8U3 227 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 IGIPA6NJ69 53 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 ODF3BA8MYP8 253 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 BUB3O43684 328 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 DUSP14O95147 198 aaKnown RBP4.11□□□□□ -1.75
USP8-201ENST00000307179 GAS8-AS1O95177 125 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 CTSGP08311 255 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 MINOS1Q5TGZ0 78 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 LYPD2Q6UXB3 125 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 LRRC75A-AS1Q8N1F1 130 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 PRSS33Q8NF86 280 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 COPS9Q8WXC6 57 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 DNAJC30Q96LL9 226 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 ODF3Q96PU9 254 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 KIR2DL4Q99706 377 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 CITED2Q99967 270 aaPredicted RBP4.11□□□□□ -1.75
USP8-201ENST00000307179 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 PPDPFQ9H3Y8 114 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 MINOS1-NBL1R4GNA1 71 aa4.11□□□□□ -1.75
USP8-201ENST00000307179 A0A0J9YXY3 114 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 A0A1W2PNU3 283 aaPredicted RBP4.1□□□□□ -1.75
USP8-201ENST00000307179 TIMM23O14925 209 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 CXCL5P42830 114 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 NSUN5P1Q3KNT7 163 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 C1orf122Q6ZSJ8 110 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 Q8N6K4 173 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 FAM57AQ8TBR7 257 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 PTH2Q96A98 100 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 METTL26Q96S19 204 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 AMELXQ99217 191 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 U3KQE9 123 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 FAM90A27PA6NNH2 459 aa4.1□□□□□ -1.75
USP8-201ENST00000307179 B9A039 149 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms