RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SMIM27A0A1W2PRY6 76 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 COX7A2LO14548 114 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 IGKV4-1P06312 121 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 ELANEP08246 267 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 FAM231DQ6ZW35 169 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 WDR86Q86TI4 376 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 WIPF2Q8TF74 440 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-201ENST00000302528 J3KT08 172 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 LYL1P12980 280 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 BRK1Q8WUW1 75 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 H3BQ85 93 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 MST1P26927 711 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 MRPL23Q16540 153 aaKnown RBP8.23□□□□□ -1.09
CLIP1-201ENST00000302528 PIFOQ8TCI5 191 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 VOPP1Q96AW1 172 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 CCL25O15444 150 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 FLVCR1-AS1Q8TAF5 88 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 V9GYV3 84 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 RNF183Q96D59 192 aa8.23□□□□□ -1.09
CLIP1-201ENST00000302528 LTAP01374 205 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 GYPEP15421 78 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 CRIPAKQ8N1N5 446 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 GBF1Q92538 1859 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 PRSS47A8MTI9 375 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 SEM1Q6ZVN7 128 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 GNRH2O43555 120 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 Q6ZS92 163 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 RNF144BQ7Z419 303 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 PLXNA3P51805 1871 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 ADCYAP1P18509 176 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 TM2D2Q9BX73 214 aa8.22□□□□□ -1.09
CLIP1-201ENST00000302528 FAM236AA0A1B0GUQ0 79 aa8.21□□□□□ -1.09
CLIP1-201ENST00000302528 FAM236BA0A1B0GV22 79 aa8.21□□□□□ -1.09
CLIP1-201ENST00000302528 IGLC7A0M8Q6 106 aa8.21□□□□□ -1.09
CLIP1-201ENST00000302528 ATP6V0E2Q8NHE4 81 aa8.21□□□□□ -1.09
CLIP1-201ENST00000302528 ALPK2Q86TB3 2170 aa8.21□□□□□ -1.09
CLIP1-201ENST00000302528 NCR3O14931 201 aa8.21□□□□□ -1.09
CLIP1-201ENST00000302528 ATP5G1P05496 136 aa8.21□□□□□ -1.1
CLIP1-201ENST00000302528 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
CLIP1-201ENST00000302528 C9JQL5 133 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 NPBQ8NG41 125 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 F8W735 103 aaPredicted RBP8.2□□□□□ -1.1
CLIP1-201ENST00000302528 SH2D6Q7Z4S9 175 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 NDUFA1O15239 70 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 LMO1P25800 156 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 MTCL1Q9Y4B5 1905 aaKnown RBP8.2□□□□□ -1.1
CLIP1-201ENST00000302528 MYO7BQ6PIF6 2116 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 LRRK1Q38SD2 2015 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 J3QKU1 62 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 QRFPP83859 136 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 K7EM74 188 aa8.2□□□□□ -1.1
CLIP1-201ENST00000302528 CCL24O00175 119 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 C9orf66Q5T8R8 295 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
CLIP1-201ENST00000302528 K7EMI3 77 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 VWA8A3KMH1 1905 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 PTPRDP23468 1912 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 K7EQD1 137 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 DEFB125Q8N687 156 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 GVINP1Q7Z2Y8 2422 aa8.19□□□□□ -1.1
CLIP1-201ENST00000302528 TAX1BP3O14907 124 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 C16orf74Q96GX8 76 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 ATRXP46100 2492 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 JMJD7-PLA2G4BH0Y9G9 81 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-201ENST00000302528 DUX4L9Q6RFH8 374 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-201ENST00000302528 Q8TCH9 128 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 TRBV12-3P01733 135 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 IL15RAQ13261 267 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 PRR30Q53SZ7 412 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-201ENST00000302528 ASPHD1Q5U4P2 390 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 TMEM61Q8N0U2 210 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 TPSG1Q9NRR2 321 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 IGHV4OR15-8A0A075B7B6 117 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 A0A087WW49 117 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 APRG1Q8IVJ8 170 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 KLF2Q9Y5W3 355 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-201ENST00000302528 FAM120AOSQ5T036 256 aa8.18□□□□□ -1.1
CLIP1-201ENST00000302528 MPDZO75970 2070 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 TEX22C9J3V5 150 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 GP9P14770 177 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 WT1-ASQ06250 92 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 ESM1Q9NQ30 184 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 NLRC5Q86WI3 1866 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 IGKV1-6A0A0C4DH72 117 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 H3BUA1 57 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 LOXP28300 417 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-201ENST00000302528 GPHB5Q86YW7 130 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 B3GALT5-AS1P59052 145 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 LINC01620Q4KN68 170 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 FXYD5Q96DB9 178 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
CLIP1-201ENST00000302528 LECT2O14960 151 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 IGLC1P0CG04 106 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms