RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MOB4Q9Y3A3 225 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 USP9XQ93008 2570 aaPredicted RBP9.86□□□□□ -0.83
HIF3A-204ENST00000300862 PIEZO1Q92508 2521 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 IGKV3-7A0A075B6H7 116 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 A0A1W2PPM0 123 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 KLK9Q2XQG4 91 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 CNFNQ9BYD5 112 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 MAP1LC3AQ9H492 121 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 KLK9Q9UKQ9 250 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 IGHV1-69DA0A0B4J2H0 117 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 RBAKDNA6NC62 111 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 IGHV1-69P01742 117 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 LEPP41159 167 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 NMUP48645 174 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 PRR9Q5T870 116 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 SHISA2Q6UWI4 295 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 UFC1Q9Y3C8 167 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 SPCS1Q9Y6A9 102 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 SIVA1O15304 175 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 ARL3P36405 182 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 OR4X2Q8NGF9 303 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 NPFFR1Q9GZQ6 430 aa9.85□□□□□ -0.83
HIF3A-204ENST00000300862 USP9YO00507 2555 aaPredicted RBP9.85□□□□□ -0.83
HIF3A-204ENST00000300862 SRSF2Q01130 221 aaKnown RBP9.84□□□□□ -0.83
HIF3A-204ENST00000300862 Q6ZS46 218 aa9.84□□□□□ -0.83
HIF3A-204ENST00000300862 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
HIF3A-204ENST00000300862 U3KQE9 123 aa9.84□□□□□ -0.83
HIF3A-204ENST00000300862 PRORYQ9H606 182 aa9.84□□□□□ -0.83
HIF3A-204ENST00000300862 CENPEQ02224 2701 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 RPL11P62913 178 aaKnown RBP9.83□□□□□ -0.84
HIF3A-204ENST00000300862 OR5A1Q8NGJ0 315 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 CACNA1AO00555 2505 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 DOPEY2Q9Y3R5 2298 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 MYO18BQ8IUG5 2567 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 BLCAPP62952 87 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 C19orf54Q5BKX5 351 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 SMPXQ9UHP9 88 aa9.83□□□□□ -0.84
HIF3A-204ENST00000300862 POLQO75417 2590 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 H3BUX3 64 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 H3BVH4 76 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 SPANXN1Q5VSR9 72 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 C9orf47Q6ZRZ4 202 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 GPHB5Q86YW7 130 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 TTTY13Q9BZ97 58 aa9.82□□□□□ -0.84
HIF3A-204ENST00000300862 F6UB75 175 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 PRSS1P07477 247 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 FXYD2P54710 66 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 TMEM158Q8WZ71 300 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 CCL19Q99731 98 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 ZANQ9Y493 2812 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 IGHV4-30-2A0A087WSY4 118 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 FAM223BA6NKX1 122 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 FAM223AQ8IWN6 122 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 PIMREGQ9BSJ6 248 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 IGSF10Q6WRI0 2623 aa9.81□□□□□ -0.84
HIF3A-204ENST00000300862 FABP2P12104 132 aa9.8□□□□□ -0.84
HIF3A-204ENST00000300862 SRD5A1P18405 259 aa9.8□□□□□ -0.84
HIF3A-204ENST00000300862 FCER1GP30273 86 aa9.8□□□□□ -0.84
HIF3A-204ENST00000300862 SAMD5Q5TGI4 173 aa9.8□□□□□ -0.84
HIF3A-204ENST00000300862 NXT2Q9NPJ8 142 aaKnown RBP9.8□□□□□ -0.84
HIF3A-204ENST00000300862 K7ERJ3 54 aa9.8□□□□□ -0.84
HIF3A-204ENST00000300862 DOPEY1Q5JWR5 2465 aa9.8□□□□□ -0.84
HIF3A-204ENST00000300862 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 M0R381 172 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 EDN2P20800 178 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 GCSHP23434 173 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 ATP5J2P56134 94 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 MRPL53Q96EL3 112 aaKnown RBP9.79□□□□□ -0.84
HIF3A-204ENST00000300862 ACACBO00763 2458 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 ZFYVE26Q68DK2 2539 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 SMIM17P0DL12 118 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 NRACQ8N912 160 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 C10orf105Q8TEF2 133 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 NRGNQ92686 78 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 FOXC2Q99958 501 aa9.79□□□□□ -0.84
HIF3A-204ENST00000300862 IGLV2-18A0A075B6J9 118 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 A0A1B0GV72 72 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 SMIM13P0DJ93 91 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 C9orf139Q6ZV77 190 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 PHLDA1Q8WV24 401 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-204ENST00000300862 HHLA3Q9XRX5 114 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 FAM208BQ5VWN6 2430 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 AVPP01185 164 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 ZFAND2AQ8N6M9 145 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 Q8N8P6 123 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 CHAC1Q9BUX1 264 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 HIF1ANQ9NWT6 349 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 CREBBPQ92793 2442 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 SORL1Q92673 2214 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 AGRNO00468 2067 aa9.78□□□□□ -0.84
HIF3A-204ENST00000300862 ZMAT4Q9H898 229 aa9.77□□□□□ -0.84
HIF3A-204ENST00000300862 HIGD1BQ9P298 99 aa9.77□□□□□ -0.84
HIF3A-204ENST00000300862 LINC01546A6NGU7 62 aa9.77□□□□□ -0.85
HIF3A-204ENST00000300862 NDUFA4O00483 81 aa9.77□□□□□ -0.85
HIF3A-204ENST00000300862 RNASE4P34096 147 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms