RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 PAX2Q02962 417 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 PAPPA-AS1Q5QFB9 102 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 ZNF418Q8TF45 676 aaPredicted RBP12.68□□□□□ -0.38
DCLK2-201ENST00000296550 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
DCLK2-201ENST00000296550 CD300EQ496F6 205 aaPredicted RBP12.68□□□□□ -0.38
DCLK2-201ENST00000296550 APOMO95445 188 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 SMAGPQ0VAQ4 97 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 FOXE3Q13461 319 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 RRN3P1Q2M238 152 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 Q8N8P6 123 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 TNFRSF18Q9Y5U5 241 aa12.68□□□□□ -0.38
DCLK2-201ENST00000296550 A0A1B0GV72 72 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 BVES-AS1Q5T3Y7 98 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 MRPL16Q9NX20 251 aaKnown RBP12.67□□□□□ -0.38
DCLK2-201ENST00000296550 GATA1P15976 413 aaPredicted RBP12.67□□□□□ -0.38
DCLK2-201ENST00000296550 GATA3P23771 443 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 LINC01587Q99440 93 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 C2orf70A6NJV1 201 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 LY6LH3BQJ8 138 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 PF4P02776 101 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 Q8N976 141 aa12.67□□□□□ -0.38
DCLK2-201ENST00000296550 TNFRSF13BO14836 293 aaPredicted RBP12.66□□□□□ -0.38
DCLK2-201ENST00000296550 SIRPDQ9H106 197 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 LAMA1P25391 3075 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 ODF3BA8MYP8 253 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 NRGNQ92686 78 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 A0A087WWL8 130 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 ZNF815PA8K554 130 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 ANXA2RQ3ZCQ2 193 aa12.66□□□□□ -0.38
DCLK2-201ENST00000296550 TRBV6-1A0A0K0K1D8 114 aa12.65□□□□□ -0.38
DCLK2-201ENST00000296550 DKK2Q9UBU2 259 aa12.65□□□□□ -0.38
DCLK2-201ENST00000296550 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
DCLK2-201ENST00000296550 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
DCLK2-201ENST00000296550 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
DCLK2-201ENST00000296550 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.38
DCLK2-201ENST00000296550 PLNP26678 52 aa12.65□□□□□ -0.38
DCLK2-201ENST00000296550 SUMO2P61956 95 aaKnown RBP12.65□□□□□ -0.38
DCLK2-201ENST00000296550 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
DCLK2-201ENST00000296550 F6UB75 175 aa12.65□□□□□ -0.39
DCLK2-201ENST00000296550 DEFB125Q8N687 156 aa12.65□□□□□ -0.39
DCLK2-201ENST00000296550 MRAP2Q96G30 205 aa12.65□□□□□ -0.39
DCLK2-201ENST00000296550 SPRY2O43597 315 aa12.64□□□□□ -0.39
DCLK2-201ENST00000296550 FSTL3O95633 263 aa12.64□□□□□ -0.39
DCLK2-201ENST00000296550 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
DCLK2-201ENST00000296550 IGHV4-38-2P0DP08 117 aa12.64□□□□□ -0.39
DCLK2-201ENST00000296550 LINC01545Q5VT33 79 aa12.64□□□□□ -0.39
DCLK2-201ENST00000296550 ABCA12Q86UK0 2595 aa12.64□□□□□ -0.39
DCLK2-201ENST00000296550 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
DCLK2-201ENST00000296550 GEMIN7Q9H840 131 aaKnown RBP12.63□□□□□ -0.39
DCLK2-201ENST00000296550 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
DCLK2-201ENST00000296550 VCX2Q9H322 139 aa12.63□□□□□ -0.39
DCLK2-201ENST00000296550 BLCAPP62952 87 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 C5orf56Q8N8D9 126 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 ZNF479Q96JC4 524 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 MRPL35Q9NZE8 188 aaKnown RBP12.62□□□□□ -0.39
DCLK2-201ENST00000296550 TET2Q6N021 2002 aaPredicted RBP12.62□□□□□ -0.39
DCLK2-201ENST00000296550 VCYO14598 125 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 LINC01548A6NM66 108 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 EMP1P54849 157 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 C2orf66Q6UXQ4 117 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 Q96MF0 132 aa12.62□□□□□ -0.39
DCLK2-201ENST00000296550 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
DCLK2-201ENST00000296550 ZNF80P51504 273 aaPredicted RBP12.61□□□□□ -0.39
DCLK2-201ENST00000296550 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
DCLK2-201ENST00000296550 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
DCLK2-201ENST00000296550 TRGV11A0A075B6L2 103 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 IGHV4-59P01825 116 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 KLHL30-AS1Q8NEE0 82 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 VCANP13611 3396 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 C19orf84I3L1E1 186 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 LMO4P61968 165 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 IGHV7-4-1A0A0J9YVY3 117 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 VWC2LB2RUY7 222 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 CDSNQ15517 529 aa12.6□□□□□ -0.39
DCLK2-201ENST00000296550 A0A1B0GWB2 263 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 STHQ8IWL8 128 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 C10orf105Q8TEF2 133 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 TMEM95Q3KNT9 176 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 PCP2Q8IVA1 136 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 SIGMAR1Q99720 223 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 CRIP1P50238 77 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 LOXL1Q08397 574 aaPredicted RBP12.59□□□□□ -0.39
DCLK2-201ENST00000296550 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 LINC01549A6NIU2 74 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 IGLV2-11P01706 119 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
DCLK2-201ENST00000296550 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
DCLK2-201ENST00000296550 GNRH2O43555 120 aa12.58□□□□□ -0.4
DCLK2-201ENST00000296550 LENEPQ9Y5L5 61 aa12.58□□□□□ -0.4
DCLK2-201ENST00000296550 HOXA3O43365 443 aaPredicted RBP12.58□□□□□ -0.4
DCLK2-201ENST00000296550 JMJD1CQ15652 2540 aa12.58□□□□□ -0.4
DCLK2-201ENST00000296550 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
DCLK2-201ENST00000296550 POLQO75417 2590 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms