RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 TRAV12-3A0A0B4J271 114 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 ZNF56Q15929 161 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 LY6G5BQ8NDX9 201 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 LOC107984156A0A0G2JMH3 177 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 GAGE12BA1L429 117 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 PPBPP02775 128 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 ARL17AQ8IVW1 177 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 C11orf44Q8N8P7 122 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 RHPN1-AS1Q9BWJ2 59 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 ZNF462Q96JM2 2506 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 CENPVL3A0A0U1RRI6 287 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 DPM2O94777 84 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 IGHV4-38-2P0DP08 117 aa12.3□□□□□ -0.44
SMAD6-201ENST00000288840 OR11H12B2RN74 326 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 K7EP13 123 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
SMAD6-201ENST00000288840 OR11H1Q8NG94 326 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 IGHV3OR16-12A0A075B7B8 117 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 TMEM238C9JI98 176 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 C19orf84I3L1E1 186 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 K7ERJ3 54 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 SMAD7O15105 426 aaKnown RBP12.29□□□□□ -0.44
SMAD6-201ENST00000288840 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 A0A0G2JLM5 398 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 CD300EQ496F6 205 aaPredicted RBP12.29□□□□□ -0.44
SMAD6-201ENST00000288840 TMEM170BQ5T4T1 132 aa12.29□□□□□ -0.44
SMAD6-201ENST00000288840 MRPL35Q9NZE8 188 aaKnown RBP12.29□□□□□ -0.44
SMAD6-201ENST00000288840 GNRH2O43555 120 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 UNQ9165/PRO28630Q6UXU0 137 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 ATP5LO75964 103 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 LAGE3Q14657 143 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 LINC01545Q5VT33 79 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 LINC00477Q96M19 166 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 IGHV3-64A0A075B6Q5 118 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 TRBV7-1A0A0A6YYK4 115 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 MEGF9Q9H1U4 602 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
SMAD6-201ENST00000288840 IGHV3-73A0A0B4J1V6 119 aa12.27□□□□□ -0.44
SMAD6-201ENST00000288840 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.44
SMAD6-201ENST00000288840 SCGB1C2P0DMR2 95 aa12.27□□□□□ -0.44
SMAD6-201ENST00000288840 HIVEP2P31629 2446 aa12.27□□□□□ -0.44
SMAD6-201ENST00000288840 COL27A1Q8IZC6 1860 aaPredicted RBP12.27□□□□□ -0.44
SMAD6-201ENST00000288840 TRAV12-2A0A075B6T6 113 aa12.27□□□□□ -0.45
SMAD6-201ENST00000288840 TRAV21A0A0B4J279 112 aa12.27□□□□□ -0.45
SMAD6-201ENST00000288840 APOMO95445 188 aa12.27□□□□□ -0.45
SMAD6-201ENST00000288840 SRSF1Q07955 248 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMAD6-201ENST00000288840 ACANP16112 2415 aa12.27□□□□□ -0.45
SMAD6-201ENST00000288840 CYSLTR1Q9Y271 337 aa12.27□□□□□ -0.45
SMAD6-201ENST00000288840 CD5LO43866 347 aa12.26□□□□□ -0.45
SMAD6-201ENST00000288840 ANXA2RQ3ZCQ2 193 aa12.26□□□□□ -0.45
SMAD6-201ENST00000288840 TAX1BP3O14907 124 aa12.26□□□□□ -0.45
SMAD6-201ENST00000288840 ID1P41134 155 aa12.26□□□□□ -0.45
SMAD6-201ENST00000288840 CCDC140Q96MF4 163 aa12.26□□□□□ -0.45
SMAD6-201ENST00000288840 CSMD1Q96PZ7 3565 aa12.26□□□□□ -0.45
SMAD6-201ENST00000288840 ODF3BA8MYP8 253 aa12.26□□□□□ -0.45
SMAD6-201ENST00000288840 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
SMAD6-201ENST00000288840 HSD52Q0P140 79 aa12.25□□□□□ -0.45
SMAD6-201ENST00000288840 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
SMAD6-201ENST00000288840 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
SMAD6-201ENST00000288840 IGHV4-39P01824 125 aa12.25□□□□□ -0.45
SMAD6-201ENST00000288840 DPF1Q92782 380 aa12.25□□□□□ -0.45
SMAD6-201ENST00000288840 SIRPDQ9H106 197 aa12.25□□□□□ -0.45
SMAD6-201ENST00000288840 OR1N2Q8NGR9 330 aa12.25□□□□□ -0.45
SMAD6-201ENST00000288840 Q1RN00 199 aa12.24□□□□□ -0.45
SMAD6-201ENST00000288840 RPL39LQ96EH5 51 aaKnown RBP12.24□□□□□ -0.45
SMAD6-201ENST00000288840 CST9LQ9H4G1 147 aa12.24□□□□□ -0.45
SMAD6-201ENST00000288840 IGKV3D-20A0A0C4DH25 116 aa12.24□□□□□ -0.45
SMAD6-201ENST00000288840 SEC11AP67812 179 aa12.24□□□□□ -0.45
SMAD6-201ENST00000288840 JMJD1CQ15652 2540 aa12.24□□□□□ -0.45
SMAD6-201ENST00000288840 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
SMAD6-201ENST00000288840 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
SMAD6-201ENST00000288840 DEFB125Q8N687 156 aa12.23□□□□□ -0.45
SMAD6-201ENST00000288840 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
SMAD6-201ENST00000288840 FN1P02751 2386 aaKnown RBP12.23□□□□□ -0.45
SMAD6-201ENST00000288840 F8W735 103 aaPredicted RBP12.23□□□□□ -0.45
SMAD6-201ENST00000288840 SAMD5Q5TGI4 173 aa12.23□□□□□ -0.45
SMAD6-201ENST00000288840 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
SMAD6-201ENST00000288840 CHAC1Q9BUX1 264 aa12.23□□□□□ -0.45
SMAD6-201ENST00000288840 FBXL19-AS1Q494R0 122 aa12.22□□□□□ -0.45
SMAD6-201ENST00000288840 KIR2DL4Q99706 377 aa12.22□□□□□ -0.45
SMAD6-201ENST00000288840 LMO4P61968 165 aa12.22□□□□□ -0.45
SMAD6-201ENST00000288840 KLK9Q9UKQ9 250 aa12.22□□□□□ -0.45
SMAD6-201ENST00000288840 IGHV4-30-2A0A087WSY4 118 aa12.21□□□□□ -0.45
SMAD6-201ENST00000288840 SYNJ2BPP57105 145 aa12.21□□□□□ -0.45
SMAD6-201ENST00000288840 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.45
SMAD6-201ENST00000288840 C11orf21Q9P2W6 132 aa12.21□□□□□ -0.45
SMAD6-201ENST00000288840 C5orf56Q8N8D9 126 aa12.21□□□□□ -0.45
SMAD6-201ENST00000288840 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
SMAD6-201ENST00000288840 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.46
SMAD6-201ENST00000288840 PRSS2P07478 247 aa12.2□□□□□ -0.46
SMAD6-201ENST00000288840 OCIAD2Q56VL3 154 aa12.2□□□□□ -0.46
SMAD6-201ENST00000288840 SAP30O75446 220 aa12.2□□□□□ -0.46
SMAD6-201ENST00000288840 SPINK13Q1W4C9 94 aa12.2□□□□□ -0.46
SMAD6-201ENST00000288840 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
SMAD6-201ENST00000288840 MRPS12O15235 138 aaKnown RBP12.2□□□□□ -0.46
SMAD6-201ENST00000288840 JPT2Q9H910 190 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms