RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NEU4Q8WWR8 484 aaPredicted RBP9.96□□□□□ -0.82
SLC6A1-201ENST00000287766 C8orf49Q96NF6 230 aa9.96□□□□□ -0.82
SLC6A1-201ENST00000287766 IGLC1P0CG04 106 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 PATE2Q6UY27 113 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 FAM231DQ6ZW35 169 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 SPANXA1Q9NS26 97 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 MYMXA0A1B0GTQ4 84 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 PRSS29PA6NIE9 313 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 PRSS33Q8NF86 280 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 CCDC168Q8NDH2 2452 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 PIEZO1Q92508 2521 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 ATG2AQ2TAZ0 1938 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 TRGV2A0A075B6R0 118 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 TRAV26-2A0A0B4J265 109 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 NDUFS7O75251 213 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 IGFL2Q6UWQ7 119 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 YPEL4Q96NS1 127 aa9.95□□□□□ -0.82
SLC6A1-201ENST00000287766 CRPP02741 224 aa9.94□□□□□ -0.82
SLC6A1-201ENST00000287766 TNRC6AQ8NDV7 1962 aaKnown RBP9.94□□□□□ -0.82
SLC6A1-201ENST00000287766 CT83Q5H943 113 aa9.94□□□□□ -0.82
SLC6A1-201ENST00000287766 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
SLC6A1-201ENST00000287766 ZNF492Q9P255 531 aa9.94□□□□□ -0.82
SLC6A1-201ENST00000287766 PRO3102Q9H379 93 aa9.94□□□□□ -0.82
SLC6A1-201ENST00000287766 SETD2Q9BYW2 2564 aaPredicted RBP9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 TLN2Q9Y4G6 2542 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 C22orf46C9J442 243 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 NDUFB8O95169 186 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 C1orf159Q96HA4 380 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 LAMTOR3Q9UHA4 124 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 TP53TG1Q9Y2A0 90 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 SHANK2-AS3Q9BTD1 123 aa9.93□□□□□ -0.82
SLC6A1-201ENST00000287766 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 C7orf69Q9H7B7 122 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 G3V318 75 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 TMEM86BQ8N661 226 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 SIGLEC15Q6ZMC9 328 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 LYPD1Q8N2G4 141 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 F8VRH5 84 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 HAX1O00165 279 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 FXYD2P54710 66 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 PAX8Q06710 450 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 FAM120AOSQ5T036 256 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 CFAP161Q6P656 301 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 TMEM75Q8N9X5 138 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 FAM167A-AS1Q96KT0 104 aa9.92□□□□□ -0.82
SLC6A1-201ENST00000287766 IL17RELQ6ZVW7 336 aa9.91□□□□□ -0.82
SLC6A1-201ENST00000287766 EXPH5Q8NEV8 1989 aa9.91□□□□□ -0.82
SLC6A1-201ENST00000287766 HLA-DMBP28068 263 aa9.91□□□□□ -0.82
SLC6A1-201ENST00000287766 ZNF503Q96F45 646 aa9.91□□□□□ -0.82
SLC6A1-201ENST00000287766 JPT2Q9H910 190 aa9.91□□□□□ -0.82
SLC6A1-201ENST00000287766 TRBV19A0A075B6N1 114 aa9.91□□□□□ -0.82
SLC6A1-201ENST00000287766 IGLL5B9A064 214 aa9.91□□□□□ -0.82
SLC6A1-201ENST00000287766 SHISA9B4DS77 424 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 PRSS46E5RG02 174 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 BPESC1Q9GZL8 116 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 Q8N8P6 123 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 SIVA1O15304 175 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 EIF4EBP1Q13541 118 aaPredicted RBP9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 LY6G5BQ8NDX9 201 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 CHCHD5Q9BSY4 110 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 EYSQ5T1H1 3165 aa9.9□□□□□ -0.82
SLC6A1-201ENST00000287766 OVOL1O14753 267 aa9.9□□□□□ -0.83
SLC6A1-201ENST00000287766 FOXI2Q6ZQN5 318 aa9.9□□□□□ -0.83
SLC6A1-201ENST00000287766 CARD19Q96LW7 228 aa9.9□□□□□ -0.83
SLC6A1-201ENST00000287766 USP9YO00507 2555 aaPredicted RBP9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 ADARB2-AS1A8MUL3 147 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 FCN3O75636 299 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 S100A7L2Q5SY68 101 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 C8orf86Q6ZUL3 223 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 PIMREGQ9BSJ6 248 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 SAA4P35542 130 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 LINC00311Q8N616 119 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 PHLDA1Q8WV24 401 aaPredicted RBP9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 C1orf43Q9BWL3 253 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 TP73-AS1Q9UF72 201 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 G3V4G9 280 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 CCL19Q99731 98 aa9.89□□□□□ -0.83
SLC6A1-201ENST00000287766 TRACP01848 142 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 CGB3P0DN86 165 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 CGB7P0DN87 165 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 RBX1P62877 108 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 THAP8Q8NA92 274 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 MRPL23Q16540 153 aaKnown RBP9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 DTX2Q86UW9 622 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 DSCAMO60469 2012 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 RUSC1-AS1Q66K80 236 aa9.88□□□□□ -0.83
SLC6A1-201ENST00000287766 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 PRR25Q96S07 402 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 K7ENP7 123 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 ATP6V0E1O15342 81 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 INAFM2P0DMQ5 153 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 GATA1P15976 413 aaPredicted RBP9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 TAL2Q16559 108 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
SLC6A1-201ENST00000287766 SPRY2O43597 315 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms