RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 JMJD8Q96S16 334 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 CT45A10P0DMU9 189 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 MRPL54Q6P161 138 aaKnown RBP8.76□□□□□ -1.01
SSRP1-201ENST00000278412 Q6ZWC4 215 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 TMEM256Q8N2U0 113 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 ANAPC16Q96DE5 110 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 LY96Q9Y6Y9 160 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 NUPR1O60356 82 aa8.75□□□□□ -1.01
SSRP1-201ENST00000278412 PAFAH1B2P68402 229 aa8.75□□□□□ -1.01
SSRP1-201ENST00000278412 BMI1P35226 326 aa8.75□□□□□ -1.01
SSRP1-201ENST00000278412 PRIMA1Q86XR5 153 aa8.75□□□□□ -1.01
SSRP1-201ENST00000278412 OR4B1Q8NGF8 309 aa8.75□□□□□ -1.01
SSRP1-201ENST00000278412 CLEC5AQ9NY25 188 aa8.75□□□□□ -1.01
SSRP1-201ENST00000278412 KNCNA6PVL3 124 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 K7EQG2 157 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 SH2D1AO60880 128 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 CTRLP40313 264 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 FXYD7P58549 80 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 APRG1Q8IVJ8 170 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 OR4C5Q8NGB2 326 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 WFDC10AQ9H1F0 79 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 IL36BQ9NZH7 164 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 LAMTOR2Q9Y2Q5 125 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 NBEAL1Q6ZS30 2694 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 M0QZ24 198 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 ESDP10768 282 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 KRTAP24-1Q3LI83 254 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 TPPP3Q9BW30 176 aa8.74□□□□□ -1.01
SSRP1-201ENST00000278412 K7EQM0 130 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 DEFB114Q30KQ6 69 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 UQCR10Q9UDW1 63 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 TRAV12-2A0A075B6T6 113 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 A0A1B0GUS0 222 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 HIGD1CA8MV81 97 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 OVOL1O14753 267 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 P01737 135 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 PRM2P04554 102 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 OCIAD2Q56VL3 154 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 NUP35Q8NFH5 326 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 OR8A1Q8NGG7 326 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 PGLYRP4Q96LB8 373 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 CMYA5Q8N3K9 4069 aa8.73□□□□□ -1.01
SSRP1-201ENST00000278412 M0R2Z0 102 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 S100A7P31151 101 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 DYNLRB2Q8TF09 96 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 RPP21Q9H633 154 aaKnown RBP8.72□□□□□ -1.01
SSRP1-201ENST00000278412 ZNF492Q9P255 531 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 DEFB131AP59861 70 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 SMIM12Q96EX1 92 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 CST9LQ9H4G1 147 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 SMIM27A0A1W2PRY6 76 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 SAP30O75446 220 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 ZNF138P52744 262 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 FOXA3P55318 350 aaPredicted RBP8.72□□□□□ -1.01
SSRP1-201ENST00000278412 TMEM78Q5T7P6 136 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 ZFAND2AQ8N6M9 145 aa8.72□□□□□ -1.01
SSRP1-201ENST00000278412 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
SSRP1-201ENST00000278412 ANK2Q01484 3957 aa8.71□□□□□ -1.01
SSRP1-201ENST00000278412 IGLC3P0DOY3 106 aa8.71□□□□□ -1.02
SSRP1-201ENST00000278412 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
SSRP1-201ENST00000278412 C9orf47Q6ZRZ4 202 aa8.71□□□□□ -1.02
SSRP1-201ENST00000278412 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
SSRP1-201ENST00000278412 RBPMS2Q6ZRY4 209 aaKnown RBP8.71□□□□□ -1.02
SSRP1-201ENST00000278412 FAM231DQ6ZW35 169 aa8.71□□□□□ -1.02
SSRP1-201ENST00000278412 PEMTQ9UBM1 199 aa8.71□□□□□ -1.02
SSRP1-201ENST00000278412 TRAPPC1Q9Y5R8 145 aa8.71□□□□□ -1.02
SSRP1-201ENST00000278412 MGAM2Q2M2H8 2515 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 CAMPP49913 170 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 FOXL1Q12952 345 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 KCNIP4Q6PIL6 250 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 DAZAP1Q96EP5 407 aaKnown RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 ZNF256Q9Y2P7 627 aaPredicted RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 TRBV6-1A0A0K0K1D8 114 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 RBMY1BA6NDE4 496 aaKnown RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 RBMY1EA6NEQ0 496 aaKnown RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 NPIPB6E9PJ23 425 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 RBMY1DP0C7P1 496 aaKnown RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 RNASE4P34096 147 aaKnown RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 LINC00310P59036 64 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 Q8N976 141 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 OR10J6PQ8NGY7 276 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 TP53TG3Q9ULZ0 132 aa8.7□□□□□ -1.02
SSRP1-201ENST00000278412 MRPS16Q9Y3D3 137 aaKnown RBP8.7□□□□□ -1.02
SSRP1-201ENST00000278412 ORM1P02763 201 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 SPINK13Q1W4C9 94 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 FAM162BQ5T6X4 162 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 Q6ZVH6 145 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 TSKUQ8WUA8 353 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 CD7P09564 240 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 SPATA45Q537H7 98 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 Q6ZN92 141 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 MUC4Q99102 2169 aa8.69□□□□□ -1.02
SSRP1-201ENST00000278412 RBAKDNA6NC62 111 aa8.68□□□□□ -1.02
SSRP1-201ENST00000278412 ARMS2P0C7Q2 107 aa8.68□□□□□ -1.02
SSRP1-201ENST00000278412 ODF3L2Q3SX64 289 aa8.68□□□□□ -1.02
SSRP1-201ENST00000278412 MSRB1Q9NZV6 116 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms