RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 AAMDCQ9H7C9 122 aa7.07□□□□□ -1.28
HMGCLL1-201ENST00000274901 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
HMGCLL1-201ENST00000274901 PRAC2D3DTV9 90 aa7.07□□□□□ -1.28
HMGCLL1-201ENST00000274901 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
HMGCLL1-201ENST00000274901 FAM159AQ6UWV7 190 aa7.07□□□□□ -1.28
HMGCLL1-201ENST00000274901 Q6ZS46 218 aa7.07□□□□□ -1.28
HMGCLL1-201ENST00000274901 OR11H6Q8NGC7 330 aa7.07□□□□□ -1.28
HMGCLL1-201ENST00000274901 TPRP12270 2363 aaKnown RBP7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGKV3D-20A0A0C4DH25 116 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 CFC1BP0CG36 223 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 CFC1P0CG37 223 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 GLRXP35754 106 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 TRPT1Q86TN4 253 aaKnown RBP7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 NEXN-AS1Q8NBZ9 246 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 SMAD5-AS1Q9Y6J3 95 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 TRAV12-1A0A0B4J245 112 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 DLX6P56179 175 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 GAGE2BQ13066 116 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 GAGE2EQ4V326 116 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 PPP1R27Q86WC6 154 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 DYNAPQ8N1N2 210 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 LINC00311Q8N616 119 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 C3orf56Q8N813 242 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 GAGE2DQ9UEU5 116 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGHV3OR16-8A0A075B7F1 116 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 SPRY2O43597 315 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 ELANEP08246 267 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 PDE6HQ13956 83 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 SCGB1D4Q6XE38 83 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 IL17RELQ6ZVW7 336 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 TRAV8-2A0A0B4J237 113 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 ZNF672Q499Z4 452 aaPredicted RBP7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 GFRALQ6UXV0 394 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 ODF3Q96PU9 254 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 VCX2Q9H322 139 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 PTPRQQ9UMZ3 2332 aa7.05□□□□□ -1.28
HMGCLL1-201ENST00000274901 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 SLC25A20O43772 301 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGHV3-23P01764 117 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 IFITM1P13164 125 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 EMP1P54849 157 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 TSPEAR-AS2P59090 65 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 PLGLAQ15195 96 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGFL3Q6UXB1 125 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 SEM1Q6ZVN7 128 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 HIF1ANQ9NWT6 349 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 BSNQ9UPA5 3926 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 TLN1Q9Y490 2541 aaKnown RBP7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 WNK2Q9Y3S1 2297 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 SVEP1Q4LDE5 3571 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 PCNX1Q96RV3 2341 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGHV7-4-1A0A0J9YVY3 117 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 A0A0J9YY99 117 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 C9JAW5 83 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 LOXP28300 417 aaPredicted RBP7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 RNF182Q8N6D2 247 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 BAALCQ8WXS3 180 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 ADGRG4Q8IZF6 3080 aa7.04□□□□□ -1.28
HMGCLL1-201ENST00000274901 TMEM262E9PQX1 116 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 SNCGO76070 127 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 ZNF474Q6S9Z5 364 aaPredicted RBP7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 ONECUT1Q9UBC0 465 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 CENPVL3A0A0U1RRI6 287 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGHV3-30P01768 117 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGHV1-8P0DP01 117 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGHV3-30-5P0DP03 117 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 SRSF2Q01130 221 aaKnown RBP7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 Q8N1Y9 231 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 DEFB104AQ8WTQ1 72 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 RAX2Q96IS3 184 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 SMIM2Q9BVW6 85 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 SPTA1P02549 2419 aa7.03□□□□□ -1.28
HMGCLL1-201ENST00000274901 POLEQ07864 2286 aa7.02□□□□□ -1.28
HMGCLL1-201ENST00000274901 IGHV1-3A0A0C4DH29 117 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 RNF223E7ERA6 249 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 ID1P41134 155 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 TTC32Q5I0X7 151 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 C10orf126Q8N4M7 172 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 C8orf31Q8N9H6 132 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 TMEM190Q8WZ59 177 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 TOMM6Q96B49 74 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 RPL39LQ96EH5 51 aaKnown RBP7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 PPDPFQ9H3Y8 114 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 CHD8Q9HCK8 2581 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 TEX49A0A1B0GTD5 131 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 CRYGDP07320 174 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 SCGB1C2P0DMR2 95 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 FAM215AQ9Y5M1 114 aa7.02□□□□□ -1.29
HMGCLL1-201ENST00000274901 IGHV3-35A0A0C4DH35 117 aa7.01□□□□□ -1.29
HMGCLL1-201ENST00000274901 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
HMGCLL1-201ENST00000274901 TMEM155Q4W5P6 130 aa7.01□□□□□ -1.29
HMGCLL1-201ENST00000274901 VPREB3Q9UKI3 123 aa7.01□□□□□ -1.29
HMGCLL1-201ENST00000274901 RELNP78509 3460 aa7.01□□□□□ -1.29
HMGCLL1-201ENST00000274901 IGLV4-69A0A075B6H9 119 aa7.01□□□□□ -1.29
HMGCLL1-201ENST00000274901 H7C2G1 150 aa7.01□□□□□ -1.29
HMGCLL1-201ENST00000274901 ASIPP42127 132 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms