RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 SIGLEC8Q9NYZ4 499 aa10.88□□□□□ -0.67
TRIM23-202ENST00000274327 F6UB75 175 aa10.88□□□□□ -0.67
TRIM23-202ENST00000274327 CTRLP40313 264 aa10.88□□□□□ -0.67
TRIM23-202ENST00000274327 AMTP48728 403 aa10.88□□□□□ -0.67
TRIM23-202ENST00000274327 DEFB114Q30KQ6 69 aa10.88□□□□□ -0.67
TRIM23-202ENST00000274327 C2CD3Q4AC94 2353 aa10.88□□□□□ -0.67
TRIM23-202ENST00000274327 HIGD1CA8MV81 97 aa10.87□□□□□ -0.67
TRIM23-202ENST00000274327 APCSP02743 223 aa10.87□□□□□ -0.67
TRIM23-202ENST00000274327 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
TRIM23-202ENST00000274327 FOXA3P55318 350 aaPredicted RBP10.87□□□□□ -0.67
TRIM23-202ENST00000274327 SNRPD3P62318 126 aaKnown RBP10.87□□□□□ -0.67
TRIM23-202ENST00000274327 HIST1H1AQ02539 215 aaPredicted RBP10.87□□□□□ -0.67
TRIM23-202ENST00000274327 DYNLRB2Q8TF09 96 aa10.87□□□□□ -0.67
TRIM23-202ENST00000274327 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 FABP5P3A8MUU1 101 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 TMEM61Q8N0U2 210 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.86□□□□□ -0.67
TRIM23-202ENST00000274327 Q8N976 141 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 ZNF25P17030 456 aaPredicted RBP10.86□□□□□ -0.67
TRIM23-202ENST00000274327 RBPMS2Q6ZRY4 209 aaKnown RBP10.86□□□□□ -0.67
TRIM23-202ENST00000274327 BORCS7Q96B45 105 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 PAM16Q9Y3D7 125 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 GOLT1BQ9Y3E0 138 aa10.86□□□□□ -0.67
TRIM23-202ENST00000274327 TRAV25A0A0B4J276 109 aa10.85□□□□□ -0.67
TRIM23-202ENST00000274327 TMEM189A5PLL7 270 aa10.85□□□□□ -0.67
TRIM23-202ENST00000274327 SPINK4O60575 86 aa10.85□□□□□ -0.67
TRIM23-202ENST00000274327 APRG1Q8IVJ8 170 aa10.85□□□□□ -0.67
TRIM23-202ENST00000274327 ZFAND2AQ8N6M9 145 aa10.85□□□□□ -0.67
TRIM23-202ENST00000274327 A0A0J9YX75 114 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 SRIP30626 198 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 KRTDAPP60985 99 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 CD300EQ496F6 205 aaPredicted RBP10.84□□□□□ -0.67
TRIM23-202ENST00000274327 PRR9Q5T870 116 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 GDF5OSQ5U4N7 250 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 MRPL54Q6P161 138 aaKnown RBP10.84□□□□□ -0.67
TRIM23-202ENST00000274327 ZNF575Q86XF7 245 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 SETD2Q9BYW2 2564 aaPredicted RBP10.84□□□□□ -0.67
TRIM23-202ENST00000274327 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
TRIM23-202ENST00000274327 RPS20P60866 119 aaKnown RBP10.84□□□□□ -0.67
TRIM23-202ENST00000274327 MRPS16Q9Y3D3 137 aaKnown RBP10.84□□□□□ -0.67
TRIM23-202ENST00000274327 WNK1Q9H4A3 2382 aa10.83□□□□□ -0.68
TRIM23-202ENST00000274327 IGLC3P0DOY3 106 aa10.83□□□□□ -0.68
TRIM23-202ENST00000274327 SPATA45Q537H7 98 aa10.83□□□□□ -0.68
TRIM23-202ENST00000274327 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
TRIM23-202ENST00000274327 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
TRIM23-202ENST00000274327 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
TRIM23-202ENST00000274327 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
TRIM23-202ENST00000274327 FOXI2Q6ZQN5 318 aa10.82□□□□□ -0.68
TRIM23-202ENST00000274327 NIT1Q86X76 327 aa10.82□□□□□ -0.68
TRIM23-202ENST00000274327 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
TRIM23-202ENST00000274327 F2Z2F3 143 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 CD33P20138 364 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 TDRG1Q3Y452 100 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 Q6AWC8 147 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 EBLN2Q6P2I7 272 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 ZNF256Q9Y2P7 627 aaPredicted RBP10.81□□□□□ -0.68
TRIM23-202ENST00000274327 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 IGKV3D-20A0A0C4DH25 116 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 KLLNB2CW77 178 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 DUSP14O95147 198 aaKnown RBP10.81□□□□□ -0.68
TRIM23-202ENST00000274327 C3orf79P0CE67 100 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 PMCHP20382 165 aa10.81□□□□□ -0.68
TRIM23-202ENST00000274327 SORL1Q92673 2214 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 HSBP1O75506 76 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 ORM1P02763 201 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 BTF3P20290 206 aaKnown RBP10.8□□□□□ -0.68
TRIM23-202ENST00000274327 G0S2P27469 103 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 DEFB131AP59861 70 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 Q6ZQT7 251 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 RCHY1Q96PM5 261 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 AGRNO00468 2067 aa10.8□□□□□ -0.68
TRIM23-202ENST00000274327 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 A8MTW9 85 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 HNRNPA3P51991 378 aaKnown RBP10.79□□□□□ -0.68
TRIM23-202ENST00000274327 HBBP68871 147 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 LINC00482Q8N8I6 264 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 CHCHD1Q96BP2 118 aaKnown RBP10.79□□□□□ -0.68
TRIM23-202ENST00000274327 CITED1Q99966 193 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 MAP6D1Q9H9H5 199 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 J3KRW8 73 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 LEPP41159 167 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 SLAQ13239 276 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 KIR3DS1Q14943 382 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 OR2K2Q8NGT1 345 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 ORAOV1Q8WV07 137 aa10.79□□□□□ -0.68
TRIM23-202ENST00000274327 ALKBH7Q9BT30 221 aaPredicted RBP10.79□□□□□ -0.68
TRIM23-202ENST00000274327 TRAV9-2A0A087WT02 112 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 CRXO43186 299 aaPredicted RBP10.78□□□□□ -0.68
TRIM23-202ENST00000274327 SAP30O75446 220 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 IGLV1-51P01701 117 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 HLA-DRB4P13762 266 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms