RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 EVI2AP22794 236 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 BLCAPP62952 87 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 SLC25A34Q6PIV7 304 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 MAP1LC3AQ9H492 121 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 NPSP0C0P6 89 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 Q5PR19 223 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 PRR9Q5T870 116 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 HIF1ANQ9NWT6 349 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 SELENOKQ9Y6D0 94 aa9.83□□□□□ -0.84
CPSF6-201ENST00000266679 CUBNO60494 3623 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 FN1P02751 2386 aaKnown RBP9.82□□□□□ -0.84
CPSF6-201ENST00000266679 TCF21O43680 179 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 GATA1P15976 413 aaPredicted RBP9.82□□□□□ -0.84
CPSF6-201ENST00000266679 GPHB5Q86YW7 130 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 MS4A6AQ9H2W1 248 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 GOLT1BQ9Y3E0 138 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 AVPP01185 164 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 DEFB1P60022 68 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 CACNG7P62955 275 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 Q6ZVH6 145 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 WFDC3Q8IUB2 231 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 OR4X2Q8NGF9 303 aa9.82□□□□□ -0.84
CPSF6-201ENST00000266679 JMJD1CQ15652 2540 aa9.81□□□□□ -0.84
CPSF6-201ENST00000266679 IGHV7-4-1A0A0J9YVY3 117 aa9.81□□□□□ -0.84
CPSF6-201ENST00000266679 H3BUA1 57 aa9.81□□□□□ -0.84
CPSF6-201ENST00000266679 USMG5Q96IX5 58 aa9.81□□□□□ -0.84
CPSF6-201ENST00000266679 IGKV3-7A0A075B6H7 116 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 TNFRSF6BO95407 300 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 PPBPP02775 128 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 RPL11P62913 178 aaKnown RBP9.8□□□□□ -0.84
CPSF6-201ENST00000266679 GAGE1Q13065 139 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 NPFFR1Q9GZQ6 430 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 BEX4Q9NWD9 120 aaPredicted RBP9.8□□□□□ -0.84
CPSF6-201ENST00000266679 UFC1Q9Y3C8 167 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 ANK3Q12955 4377 aaKnown RBP9.8□□□□□ -0.84
CPSF6-201ENST00000266679 SONP18583 2426 aaKnown RBP9.8□□□□□ -0.84
CPSF6-201ENST00000266679 H3BVH4 76 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 TMEM95Q3KNT9 176 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 MPV17L2Q567V2 206 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 IFI27L1Q96BM0 104 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 Q96MF0 132 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 DNHD1Q96M86 4753 aa9.8□□□□□ -0.84
CPSF6-201ENST00000266679 SOCS3O14543 225 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 OR10J6PQ8NGY7 276 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 C18orf15Q96N68 181 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 B4DSR2 109 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 TCTAP57738 103 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 ZNF124Q15973 351 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 LGALS9BQ3B8N2 356 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 LGALS9CQ6DKI2 356 aa9.79□□□□□ -0.84
CPSF6-201ENST00000266679 SNAI2O43623 268 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 BRI3O95415 125 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 LEPP41159 167 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 TM4SF20Q53R12 229 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 ANKRD39Q53RE8 183 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 SPANXN1Q5VSR9 72 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 SMIM15Q7Z3B0 74 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 PPP1R14DQ9NXH3 145 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 TRAV26-2A0A0B4J265 109 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 F6UB75 175 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 OVOL1O14753 267 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 NUDT3O95989 172 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 IGLV1-40P01703 118 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 COX8AP10176 69 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 EDN2P20800 178 aa9.78□□□□□ -0.84
CPSF6-201ENST00000266679 CR1P17927 2039 aa9.77□□□□□ -0.84
CPSF6-201ENST00000266679 ZFAND2AQ8N6M9 145 aa9.77□□□□□ -0.85
CPSF6-201ENST00000266679 OR2K2Q8NGT1 345 aa9.77□□□□□ -0.85
CPSF6-201ENST00000266679 RHPN1-AS1Q9BWJ2 59 aa9.77□□□□□ -0.85
CPSF6-201ENST00000266679 NXT2Q9NPJ8 142 aaKnown RBP9.77□□□□□ -0.85
CPSF6-201ENST00000266679 A0A0G2JLM5 398 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 SPRY2O43597 315 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 IGHV4-59P01825 116 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 SRD5A1P18405 259 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 CFHR3Q02985 330 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 COX11Q9Y6N1 276 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 FCER1GP30273 86 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 BVES-AS1Q5T3Y7 98 aa9.76□□□□□ -0.85
CPSF6-201ENST00000266679 DEFB112Q30KQ8 113 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 C2orf91Q6ZV80 131 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 Q8N8P6 123 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 MAPK1IP1LQ8NDC0 245 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 ORAOV1Q8WV07 137 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 TMEM158Q8WZ71 300 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 DKK2Q9UBU2 259 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 HIVEP2P31629 2446 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 LY6G6DO95868 133 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
CPSF6-201ENST00000266679 DSCR9P59020 149 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 LRRC75A-AS1Q8N1F1 130 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 NRACQ8N912 160 aa9.75□□□□□ -0.85
CPSF6-201ENST00000266679 DAZ1Q9NQZ3 744 aaKnown RBP9.75□□□□□ -0.85
CPSF6-201ENST00000266679 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 M0R381 172 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 FOSL1P15407 271 aa9.74□□□□□ -0.85
CPSF6-201ENST00000266679 KIR3DS1Q14943 382 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms