RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 Q8N9W7 124 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 ASPMQ8IZT6 3477 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 COX8AP10176 69 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 C8orf86Q6ZUL3 223 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 C9orf139Q6ZV77 190 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 TTC9CQ8N5M4 171 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 FANCD2OSQ96PS1 177 aa15.44■□□□□ 0.06
CSPG5-201ENST00000264723 Q5PR19 223 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 NEGR1Q7Z3B1 354 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 F6UB75 175 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 INS-IGF2F8WCM5 200 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 NDUFS8O00217 210 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 IGHV4-59P01825 116 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 CD300EQ496F6 205 aaPredicted RBP15.43■□□□□ 0.06
CSPG5-201ENST00000264723 Q8N976 141 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 LINC01587Q99440 93 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 HSD52Q0P140 79 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 FOXE3Q13461 319 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 C1orf122Q6ZSJ8 110 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 CST9LQ9H4G1 147 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 ZNF292O60281 2723 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 IGKV3OR2-268A0A0C4DH90 116 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 PSMB2P49721 201 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 SEC11AP67812 179 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 DTX2Q86UW9 622 aa15.43■□□□□ 0.06
CSPG5-201ENST00000264723 TMEM8BA6NDV4 472 aa15.42■□□□□ 0.06
CSPG5-201ENST00000264723 USMG5Q96IX5 58 aa15.42■□□□□ 0.06
CSPG5-201ENST00000264723 AGPAT4-IT1Q9H0P7 198 aa15.42■□□□□ 0.06
CSPG5-201ENST00000264723 IGHV3-73A0A0B4J1V6 119 aa15.42■□□□□ 0.06
CSPG5-201ENST00000264723 OVOL1O14753 267 aa15.42■□□□□ 0.06
CSPG5-201ENST00000264723 ZNF80P51504 273 aaPredicted RBP15.42■□□□□ 0.06
CSPG5-201ENST00000264723 DAZ1Q9NQZ3 744 aaKnown RBP15.42■□□□□ 0.06
CSPG5-201ENST00000264723 LINC01548A6NM66 108 aa15.42■□□□□ 0.06
CSPG5-201ENST00000264723 CRIP1P50238 77 aa15.42■□□□□ 0.06
CSPG5-201ENST00000264723 SLC25A16P16260 332 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 SAMD5Q5TGI4 173 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 Q96MF0 132 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 CYSLTR1Q9Y271 337 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 DMDP11532 3685 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 K7ERJ3 54 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 PRSS2P07478 247 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 CFHR4Q92496 578 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 DOPEY1Q5JWR5 2465 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 IGLV11-55A0A075B6I3 123 aa15.41■□□□□ 0.06
CSPG5-201ENST00000264723 SRSF1Q07955 248 aaKnown RBP eCLIP15.41■□□□□ 0.06
CSPG5-201ENST00000264723 IGHV3-64A0A075B6Q5 118 aa15.4■□□□□ 0.06
CSPG5-201ENST00000264723 FAM223BA6NKX1 122 aa15.4■□□□□ 0.06
CSPG5-201ENST00000264723 MYCNOSP40205 109 aa15.4■□□□□ 0.06
CSPG5-201ENST00000264723 LAGE3Q14657 143 aa15.4■□□□□ 0.06
CSPG5-201ENST00000264723 FAM223AQ8IWN6 122 aa15.4■□□□□ 0.06
CSPG5-201ENST00000264723 DEFB112Q30KQ8 113 aa15.4■□□□□ 0.06
CSPG5-201ENST00000264723 A0A087WWL8 130 aa15.39■□□□□ 0.05
CSPG5-201ENST00000264723 PF4P02776 101 aa15.39■□□□□ 0.05
CSPG5-201ENST00000264723 RRN3P1Q2M238 152 aa15.38■□□□□ 0.05
CSPG5-201ENST00000264723 ZNF418Q8TF45 676 aaPredicted RBP15.38■□□□□ 0.05
CSPG5-201ENST00000264723 MRPL35Q9NZE8 188 aaKnown RBP15.38■□□□□ 0.05
CSPG5-201ENST00000264723 OCIAD2Q56VL3 154 aa15.38■□□□□ 0.05
CSPG5-201ENST00000264723 KLHL30-AS1Q8NEE0 82 aa15.38■□□□□ 0.05
CSPG5-201ENST00000264723 URB1-AS1Q96HZ7 61 aa15.38■□□□□ 0.05
CSPG5-201ENST00000264723 MRPL16Q9NX20 251 aaKnown RBP15.38■□□□□ 0.05
CSPG5-201ENST00000264723 NPBQ8NG41 125 aa15.37■□□□□ 0.05
CSPG5-201ENST00000264723 OR9G4Q8NGQ1 327 aa15.37■□□□□ 0.05
CSPG5-201ENST00000264723 TAX1BP3O14907 124 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 LINC01545Q5VT33 79 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 SCRT2Q9NQ03 307 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 TRAV12-2A0A075B6T6 113 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 NSUN5P1Q3KNT7 163 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 CHAC1Q9BUX1 264 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 NPIPB6E9PJ23 425 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 IGLV2-11P01706 119 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 SPINK13Q1W4C9 94 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 LINC00477Q96M19 166 aa15.36■□□□□ 0.05
CSPG5-201ENST00000264723 CHTOPQ9Y3Y2 248 aaKnown RBP15.36■□□□□ 0.05
CSPG5-201ENST00000264723 LMO4P61968 165 aa15.35■□□□□ 0.05
CSPG5-201ENST00000264723 DEFB125Q8N687 156 aa15.35■□□□□ 0.05
CSPG5-201ENST00000264723 TNFRSF18Q9Y5U5 241 aa15.35■□□□□ 0.05
CSPG5-201ENST00000264723 K7EP13 123 aa15.35■□□□□ 0.05
CSPG5-201ENST00000264723 CRYGBP07316 175 aa15.35■□□□□ 0.05
CSPG5-201ENST00000264723 KALRNO60229 2985 aa15.35■□□□□ 0.05
CSPG5-201ENST00000264723 A0A1B0GWB2 263 aa15.34■□□□□ 0.05
CSPG5-201ENST00000264723 AKAP13Q12802 2813 aa15.34■□□□□ 0.05
CSPG5-201ENST00000264723 DEFB131AP59861 70 aa15.34■□□□□ 0.05
CSPG5-201ENST00000264723 PEMTQ9UBM1 199 aa15.34■□□□□ 0.05
CSPG5-201ENST00000264723 ATMQ13315 3056 aa15.34■□□□□ 0.05
CSPG5-201ENST00000264723 ZNF815PA8K554 130 aa15.33■□□□□ 0.05
CSPG5-201ENST00000264723 LGALS9BQ3B8N2 356 aa15.33■□□□□ 0.05
CSPG5-201ENST00000264723 LGALS9CQ6DKI2 356 aa15.33■□□□□ 0.05
CSPG5-201ENST00000264723 C10orf105Q8TEF2 133 aa15.33■□□□□ 0.05
CSPG5-201ENST00000264723 ZNF479Q96JC4 524 aa15.33■□□□□ 0.05
CSPG5-201ENST00000264723 SIRPDQ9H106 197 aa15.33■□□□□ 0.05
CSPG5-201ENST00000264723 WI2-2373I1.2A0A1W2PRP0 233 aa15.33■□□□□ 0.04
CSPG5-201ENST00000264723 UBE2E2Q96LR5 201 aa15.33■□□□□ 0.04
CSPG5-201ENST00000264723 SAP30O75446 220 aa15.33■□□□□ 0.04
CSPG5-201ENST00000264723 DEFB136Q30KP8 78 aa15.33■□□□□ 0.04
CSPG5-201ENST00000264723 TEX29Q8N6K0 151 aa15.33■□□□□ 0.04
CSPG5-201ENST00000264723 GAS8-AS1O95177 125 aa15.32■□□□□ 0.04
CSPG5-201ENST00000264723 CSTL1Q9H114 145 aa15.32■□□□□ 0.04
CSPG5-201ENST00000264723 KNCNA6PVL3 124 aa15.32■□□□□ 0.04
CSPG5-201ENST00000264723 HOXA3O43365 443 aaPredicted RBP15.32■□□□□ 0.04
CSPG5-201ENST00000264723 STHQ8IWL8 128 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms