RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 GGTLC3B5MD39 225 aa11.06□□□□□ -0.64
USE1-201ENST00000263897 IGLV2-11P01706 119 aa11.06□□□□□ -0.64
USE1-201ENST00000263897 SFTA3P0C7M3 94 aa11.06□□□□□ -0.64
USE1-201ENST00000263897 MRPL23Q16540 153 aaKnown RBP11.06□□□□□ -0.64
USE1-201ENST00000263897 PSG8Q9UQ74 426 aa11.06□□□□□ -0.64
USE1-201ENST00000263897 PKD1P98161 4303 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 A0A1W2PRE2 83 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 M0R2P5 195 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 TAAR5O14804 337 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 TYMSP04818 313 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 MED14OSP0DP75 135 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 ZNF726P1Q15940 193 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
USE1-201ENST00000263897 CTXND1A0A1B0GTU2 59 aa11.04□□□□□ -0.64
USE1-201ENST00000263897 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
USE1-201ENST00000263897 ZNF80P51504 273 aaPredicted RBP11.04□□□□□ -0.64
USE1-201ENST00000263897 FLI1Q01543 452 aaPredicted RBP11.04□□□□□ -0.64
USE1-201ENST00000263897 LYPD5Q6UWN5 251 aa11.04□□□□□ -0.64
USE1-201ENST00000263897 NEGR1Q7Z3B1 354 aa11.04□□□□□ -0.64
USE1-201ENST00000263897 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
USE1-201ENST00000263897 C11orf21Q9P2W6 132 aa11.04□□□□□ -0.64
USE1-201ENST00000263897 KIAA1109Q2LD37 5005 aa11.04□□□□□ -0.64
USE1-201ENST00000263897 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 ARPC5O15511 151 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 GCGP01275 180 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 SAPCD1Q5SSQ6 148 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 PRNTQ86SH4 94 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 TMEM75Q8N9X5 138 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 OR4C5Q8NGB2 326 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 CYTL1Q9NRR1 136 aa11.03□□□□□ -0.64
USE1-201ENST00000263897 HERC2O95714 4834 aa11.02□□□□□ -0.65
USE1-201ENST00000263897 SIVA1O15304 175 aa11.02□□□□□ -0.65
USE1-201ENST00000263897 PFN1P07737 140 aaKnown RBP11.02□□□□□ -0.65
USE1-201ENST00000263897 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
USE1-201ENST00000263897 SMUG1Q53HV7 270 aa11.02□□□□□ -0.65
USE1-201ENST00000263897 AKR1C8PQ5T2L2 129 aa11.02□□□□□ -0.65
USE1-201ENST00000263897 PKHD1P08F94 4074 aa11.02□□□□□ -0.65
USE1-201ENST00000263897 K7EQD1 137 aa11.01□□□□□ -0.65
USE1-201ENST00000263897 NXPH4O95158 308 aa11.01□□□□□ -0.65
USE1-201ENST00000263897 IFNA7P01567 189 aa11.01□□□□□ -0.65
USE1-201ENST00000263897 ORM1P02763 201 aa11.01□□□□□ -0.65
USE1-201ENST00000263897 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
USE1-201ENST00000263897 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
USE1-201ENST00000263897 SMLR1H3BR10 107 aa11□□□□□ -0.65
USE1-201ENST00000263897 GYPEP15421 78 aa11□□□□□ -0.65
USE1-201ENST00000263897 SRIP30626 198 aa11□□□□□ -0.65
USE1-201ENST00000263897 FGF8P55075 233 aaPredicted RBP11□□□□□ -0.65
USE1-201ENST00000263897 UBE2G2P60604 165 aa11□□□□□ -0.65
USE1-201ENST00000263897 ZFP69Q49AA0 526 aa11□□□□□ -0.65
USE1-201ENST00000263897 NKX6-2Q9C056 277 aaPredicted RBP11□□□□□ -0.65
USE1-201ENST00000263897 TRAV34A0A0B4J273 112 aa10.99□□□□□ -0.65
USE1-201ENST00000263897 FAM74A7A6NL05 159 aa10.99□□□□□ -0.65
USE1-201ENST00000263897 C9JCJ5 164 aa10.99□□□□□ -0.65
USE1-201ENST00000263897 ZNF876PQ49A33 203 aa10.99□□□□□ -0.65
USE1-201ENST00000263897 PCNPQ8WW12 178 aaKnown RBP10.99□□□□□ -0.65
USE1-201ENST00000263897 PPT1P50897 306 aa10.98□□□□□ -0.65
USE1-201ENST00000263897 KCNRGQ8N5I3 272 aa10.98□□□□□ -0.65
USE1-201ENST00000263897 HIST1H2BAQ96A08 127 aa10.98□□□□□ -0.65
USE1-201ENST00000263897 PTH2Q96A98 100 aa10.98□□□□□ -0.65
USE1-201ENST00000263897 C9orf85Q96MD7 179 aa10.98□□□□□ -0.65
USE1-201ENST00000263897 TXNDC17Q9BRA2 123 aa10.98□□□□□ -0.65
USE1-201ENST00000263897 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 MAP1LC3B2A6NCE7 125 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 FABP5P3A8MUU1 101 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 PEX7O00628 323 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 RS1O15537 224 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 CIDEAO60543 219 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 GATA1P15976 413 aaPredicted RBP10.97□□□□□ -0.65
USE1-201ENST00000263897 LINC00315P59091 139 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 MAP1LC3BQ9GZQ8 125 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 ARL2-SNX15V9GYD0 113 aa10.97□□□□□ -0.65
USE1-201ENST00000263897 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 PGPEP1LA6NFU8 196 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 HMSDA8MTL9 139 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 C16orf90A8MZG2 172 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 RNASE3P12724 160 aaKnown RBP10.96□□□□□ -0.65
USE1-201ENST00000263897 ZNF345Q14585 488 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 DPPA3Q6W0C5 159 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 OR11H4Q8NGC9 324 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 KRTAP17-1Q9BYP8 105 aa10.96□□□□□ -0.65
USE1-201ENST00000263897 IGKV3D-20A0A0C4DH25 116 aa10.95□□□□□ -0.66
USE1-201ENST00000263897 FHITP49789 147 aa10.95□□□□□ -0.66
USE1-201ENST00000263897 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
USE1-201ENST00000263897 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
USE1-201ENST00000263897 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 A0A0D9SG52 128 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 SEC11BP0C7V7 166 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 ZNF506Q5JVG8 444 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 Q86TA4 180 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 SLC25A29Q8N8R3 303 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 ZFP30Q9Y2G7 519 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 LY96Q9Y6Y9 160 aa10.94□□□□□ -0.66
USE1-201ENST00000263897 TRBV6-4A0A1B0GX49 114 aa10.93□□□□□ -0.66
USE1-201ENST00000263897 K7EP13 123 aa10.93□□□□□ -0.66
USE1-201ENST00000263897 CRIP1P50238 77 aa10.93□□□□□ -0.66
USE1-201ENST00000263897 COX8CQ7Z4L0 72 aa10.93□□□□□ -0.66
USE1-201ENST00000263897 WFDC10BQ8IUB3 73 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms