RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RASL10AQ92737 203 aa9.48□□□□□ -0.89
CHMP2B-201ENST00000263780 M0QXV9 152 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 CLEC3BP05452 202 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 XGP55808 180 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 KLK9Q2XQG4 91 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 ZFP2Q6ZN57 461 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 KLK9Q9UKQ9 250 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 MED14OSP0DP75 135 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 C15orf32Q32M92 178 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 MINOS1Q5TGZ0 78 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 DEFB124Q8NES8 71 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 TIMD4Q96H15 378 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 MINOS1-NBL1R4GNA1 71 aa9.47□□□□□ -0.89
CHMP2B-201ENST00000263780 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.89
CHMP2B-201ENST00000263780 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.89
CHMP2B-201ENST00000263780 IGHV3-35A0A0C4DH35 117 aa9.46□□□□□ -0.89
CHMP2B-201ENST00000263780 S100A4P26447 101 aaKnown RBP9.46□□□□□ -0.89
CHMP2B-201ENST00000263780 TNRC18O15417 2968 aaPredicted RBP9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 IGHV7-81A0A0B4J1V7 117 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 TRAV21A0A0B4J279 112 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 SCGB1C2P0DMR2 95 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 ASIPP42127 132 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 TEX29Q8N6K0 151 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 GLMPQ8WWB7 406 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 LINC00477Q96M19 166 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 ANAPC13Q9BS18 74 aa9.46□□□□□ -0.9
CHMP2B-201ENST00000263780 A0A0J9YY99 117 aa9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 C1orf122Q6ZSJ8 110 aa9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 PHLDA3Q9Y5J5 127 aa9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 TCL1BO95988 128 aa9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 RPL32P62910 135 aaKnown RBP9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 EEF1AKMT3Q96AZ1 226 aa9.45□□□□□ -0.9
CHMP2B-201ENST00000263780 CLPSL1A2RUU4 121 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 C9orf139Q6ZV77 190 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 VMO1Q7Z5L0 202 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 TRIOBPQ9H2D6 2365 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 ROS1P08922 2347 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 TRBV7-1A0A0A6YYK4 115 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 PTH2Q96A98 100 aa9.44□□□□□ -0.9
CHMP2B-201ENST00000263780 DMDP11532 3685 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 GAGE5Q13069 117 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 GAGE6Q13070 117 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 FHL3Q13643 280 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 PMVKQ15126 192 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 SFTA2Q6UW10 78 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 RNF183Q96D59 192 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 MGPP08493 103 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 CFC1P0CG37 223 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 OR10J6PQ8NGY7 276 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 U3KQE9 123 aa9.43□□□□□ -0.9
CHMP2B-201ENST00000263780 OVOL1O14753 267 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 IGHV3-30P01768 117 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 IGHV3-30-5P0DP03 117 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 CLEC19AQ6UXS0 136 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 Q8N9W7 124 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 KLHL30-AS1Q8NEE0 82 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 NCOR1O75376 2440 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 ANKRD29Q8N6D5 301 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 PKDREJQ9NTG1 2253 aa9.42□□□□□ -0.9
CHMP2B-201ENST00000263780 POM121L12Q8N7R1 296 aa9.41□□□□□ -0.9
CHMP2B-201ENST00000263780 CRYGDP07320 174 aa9.41□□□□□ -0.9
CHMP2B-201ENST00000263780 ECSCRQ19T08 205 aa9.41□□□□□ -0.9
CHMP2B-201ENST00000263780 TIMM17AQ99595 171 aa9.41□□□□□ -0.9
CHMP2B-201ENST00000263780 IGLV4-69A0A075B6H9 119 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 SLC25A20O43772 301 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 ARL3P36405 182 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 COLQQ9Y215 455 aaPredicted RBP9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 IGHV4OR15-8A0A075B7B6 117 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 IGHV3OR16-13A0A075B7E8 117 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 A0A087WW49 117 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 IGHV3-74A0A0B4J1X5 117 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 RNF223E7ERA6 249 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 VCYO14598 125 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 SRD5A1P18405 259 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 GPHB5Q86YW7 130 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 ITLN2Q8WWU7 325 aaPredicted RBP9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 KIR2DL4Q99706 377 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.9
CHMP2B-201ENST00000263780 IGIPA6NJ69 53 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
CHMP2B-201ENST00000263780 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 2659.9 ms