RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 C8orf31Q8N9H6 132 aa18.31■□□□□ 0.52
CCM2L-201ENST00000262659 SIT1Q9Y3P8 196 aa18.31■□□□□ 0.52
CCM2L-201ENST00000262659 H7C2G1 150 aa18.31■□□□□ 0.52
CCM2L-201ENST00000262659 ORMDL2Q53FV1 153 aa18.31■□□□□ 0.52
CCM2L-201ENST00000262659 ELANEP08246 267 aa18.3■□□□□ 0.52
CCM2L-201ENST00000262659 PRAC2D3DTV9 90 aa18.3■□□□□ 0.52
CCM2L-201ENST00000262659 EIF4EBP3O60516 100 aaPredicted RBP18.29■□□□□ 0.52
CCM2L-201ENST00000262659 EMP1P54849 157 aa18.29■□□□□ 0.52
CCM2L-201ENST00000262659 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
CCM2L-201ENST00000262659 LINC01587Q99440 93 aa18.29■□□□□ 0.52
CCM2L-201ENST00000262659 SMAD5-AS1Q9Y6J3 95 aa18.29■□□□□ 0.52
CCM2L-201ENST00000262659 C2orf66Q6UXQ4 117 aa18.29■□□□□ 0.52
CCM2L-201ENST00000262659 GFRALQ6UXV0 394 aa18.29■□□□□ 0.52
CCM2L-201ENST00000262659 TRAV2A0A0B4J234 112 aa18.28■□□□□ 0.52
CCM2L-201ENST00000262659 IGHV7-4-1A0A0J9YVY3 117 aa18.28■□□□□ 0.52
CCM2L-201ENST00000262659 SLC25A29Q8N8R3 303 aa18.28■□□□□ 0.52
CCM2L-201ENST00000262659 TMEM126AQ9H061 195 aa18.28■□□□□ 0.52
CCM2L-201ENST00000262659 RPL7P18124 248 aaKnown RBP18.28■□□□□ 0.52
CCM2L-201ENST00000262659 ATP5J2P56134 94 aa18.28■□□□□ 0.52
CCM2L-201ENST00000262659 TSPEAR-AS2P59090 65 aa18.27■□□□□ 0.52
CCM2L-201ENST00000262659 FOXC1Q12948 553 aa18.27■□□□□ 0.52
CCM2L-201ENST00000262659 LYPD2Q6UXB3 125 aa18.27■□□□□ 0.52
CCM2L-201ENST00000262659 LOC400499M0QZD8 3231 aa18.27■□□□□ 0.52
CCM2L-201ENST00000262659 C11orf86A6NJI1 115 aa18.27■□□□□ 0.52
CCM2L-201ENST00000262659 PRSS33Q8NF86 280 aa18.27■□□□□ 0.52
CCM2L-201ENST00000262659 C21orf62Q9NYP8 219 aa18.27■□□□□ 0.52
CCM2L-201ENST00000262659 IGHV3-33P01772 117 aa18.26■□□□□ 0.51
CCM2L-201ENST00000262659 RPL13AP40429 203 aaKnown RBP18.26■□□□□ 0.51
CCM2L-201ENST00000262659 SPANXN1Q5VSR9 72 aa18.26■□□□□ 0.51
CCM2L-201ENST00000262659 TIMD4Q96H15 378 aa18.26■□□□□ 0.51
CCM2L-201ENST00000262659 TIMM23O14925 209 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 LINC01620Q4KN68 170 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 RAB1BQ9H0U4 201 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 DMXL2Q8TDJ6 3036 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 TNRC18O15417 2968 aaPredicted RBP18.25■□□□□ 0.51
CCM2L-201ENST00000262659 A4D1N5 150 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 IGHV4-39P01824 125 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 CRYGDP07320 174 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 IGHV1-8P0DP01 117 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 DLX6P56179 175 aa18.25■□□□□ 0.51
CCM2L-201ENST00000262659 SUMO2P61956 95 aaKnown RBP18.25■□□□□ 0.51
CCM2L-201ENST00000262659 ATP1A1-AS1Q5TC04 95 aa18.24■□□□□ 0.51
CCM2L-201ENST00000262659 IGHV1-3A0A0C4DH29 117 aa18.24■□□□□ 0.51
CCM2L-201ENST00000262659 LGALS9O00182 355 aa18.24■□□□□ 0.51
CCM2L-201ENST00000262659 RPL39LQ96EH5 51 aaKnown RBP18.23■□□□□ 0.51
CCM2L-201ENST00000262659 CSMD1Q96PZ7 3565 aa18.23■□□□□ 0.51
CCM2L-201ENST00000262659 ROS1P08922 2347 aa18.23■□□□□ 0.51
CCM2L-201ENST00000262659 IGLV4-69A0A075B6H9 119 aa18.23■□□□□ 0.51
CCM2L-201ENST00000262659 TCF15Q12870 199 aa18.23■□□□□ 0.51
CCM2L-201ENST00000262659 CSDC2Q9Y534 153 aaKnown RBP18.23■□□□□ 0.51
CCM2L-201ENST00000262659 IGHV3OR16-8A0A075B7F1 116 aa18.22■□□□□ 0.51
CCM2L-201ENST00000262659 RNF182Q8N6D2 247 aa18.22■□□□□ 0.51
CCM2L-201ENST00000262659 TMEM263Q8WUH6 116 aaKnown RBP18.22■□□□□ 0.51
CCM2L-201ENST00000262659 H3BMM0 161 aa18.22■□□□□ 0.51
CCM2L-201ENST00000262659 NDUFB3O43676 98 aa18.22■□□□□ 0.51
CCM2L-201ENST00000262659 ATXN8Q156A1 80 aa18.22■□□□□ 0.51
CCM2L-201ENST00000262659 C14orf178Q8N769 122 aaPredicted RBP18.22■□□□□ 0.51
CCM2L-201ENST00000262659 NRGNQ92686 78 aa18.22■□□□□ 0.51
CCM2L-201ENST00000262659 UBE2WQ96B02 151 aa18.22■□□□□ 0.51
CCM2L-201ENST00000262659 P0DMU3 169 aa18.21■□□□□ 0.51
CCM2L-201ENST00000262659 FAM231AP0DMU4 169 aa18.21■□□□□ 0.51
CCM2L-201ENST00000262659 FAM231CP0DMU5 169 aa18.21■□□□□ 0.51
CCM2L-201ENST00000262659 LOXP28300 417 aaPredicted RBP18.21■□□□□ 0.51
CCM2L-201ENST00000262659 HERVK_113P61574 105 aa18.21■□□□□ 0.51
CCM2L-201ENST00000262659 ZNF56Q15929 161 aa18.21■□□□□ 0.51
CCM2L-201ENST00000262659 SLC50A1Q9BRV3 221 aa18.21■□□□□ 0.51
CCM2L-201ENST00000262659 DUSP14O95147 198 aaKnown RBP18.2■□□□□ 0.5
CCM2L-201ENST00000262659 IGHV3-23P01764 117 aa18.2■□□□□ 0.5
CCM2L-201ENST00000262659 LINC00694P0DN24 101 aa18.2■□□□□ 0.5
CCM2L-201ENST00000262659 BEX4Q9NWD9 120 aaPredicted RBP18.2■□□□□ 0.5
CCM2L-201ENST00000262659 F8W735 103 aaPredicted RBP18.19■□□□□ 0.5
CCM2L-201ENST00000262659 IGHG3P01860 377 aa18.19■□□□□ 0.5
CCM2L-201ENST00000262659 CD59P13987 128 aa18.19■□□□□ 0.5
CCM2L-201ENST00000262659 SPRY2O43597 315 aa18.19■□□□□ 0.5
CCM2L-201ENST00000262659 ZNF474Q6S9Z5 364 aaPredicted RBP18.19■□□□□ 0.5
CCM2L-201ENST00000262659 AMELXQ99217 191 aa18.19■□□□□ 0.5
CCM2L-201ENST00000262659 IGHV4-4A0A075B6R2 117 aa18.18■□□□□ 0.5
CCM2L-201ENST00000262659 TRBV10-2A0A0K0K1G8 114 aa18.18■□□□□ 0.5
CCM2L-201ENST00000262659 J3KRW8 73 aa18.18■□□□□ 0.5
CCM2L-201ENST00000262659 Q1RN00 199 aa18.18■□□□□ 0.5
CCM2L-201ENST00000262659 A0A1W2PNU3 283 aaPredicted RBP18.17■□□□□ 0.5
CCM2L-201ENST00000262659 TSHBP01222 138 aa18.17■□□□□ 0.5
CCM2L-201ENST00000262659 RNF223E7ERA6 249 aa18.17■□□□□ 0.5
CCM2L-201ENST00000262659 MFAP4P55083 255 aa18.17■□□□□ 0.5
CCM2L-201ENST00000262659 LINC01600Q96MT4 127 aa18.17■□□□□ 0.5
CCM2L-201ENST00000262659 AGPAT4-IT1Q9H0P7 198 aa18.17■□□□□ 0.5
CCM2L-201ENST00000262659 COL27A1Q8IZC6 1860 aaPredicted RBP18.17■□□□□ 0.5
CCM2L-201ENST00000262659 MSRB2Q9Y3D2 182 aa18.16■□□□□ 0.5
CCM2L-201ENST00000262659 LOC107984640A0A0U1RRK4 108 aa18.16■□□□□ 0.5
CCM2L-201ENST00000262659 TMEM170BQ5T4T1 132 aa18.16■□□□□ 0.5
CCM2L-201ENST00000262659 CCL17Q92583 94 aa18.15■□□□□ 0.5
CCM2L-201ENST00000262659 MUC3AQ02505 3323 aa18.15■□□□□ 0.5
CCM2L-201ENST00000262659 TACC2O95359 2948 aa18.15■□□□□ 0.5
CCM2L-201ENST00000262659 IGHV3-35A0A0C4DH35 117 aa18.15■□□□□ 0.5
CCM2L-201ENST00000262659 MRPL23Q16540 153 aaKnown RBP18.15■□□□□ 0.5
CCM2L-201ENST00000262659 DEFB104AQ8WTQ1 72 aa18.15■□□□□ 0.5
CCM2L-201ENST00000262659 DNAJC30Q96LL9 226 aa18.15■□□□□ 0.5
CCM2L-201ENST00000262659 IGLV1-47P01700 117 aa18.14■□□□□ 0.49
CCM2L-201ENST00000262659 C2orf82Q6UX34 121 aa18.14■□□□□ 0.49
CCM2L-201ENST00000262659 C22orf34Q6ZV56 151 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms