RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 FABP5P3A8MUU1 101 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 J3QR89 54 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 ATP6V0E1O15342 81 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 FOXI2Q6ZQN5 318 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 FABP2P12104 132 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 Q8N9W7 124 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 UBTD1Q9HAC8 227 aa7.74□□□□□ -1.17
LIG3-201ENST00000262327 SIVA1O15304 175 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 IGF1P05019 195 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 AGPAT4-IT1Q9H0P7 198 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
LIG3-201ENST00000262327 TMEM160Q9NX00 188 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 WFDC2Q14508 124 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 TMEM219Q86XT9 240 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 ZNF418Q8TF45 676 aaPredicted RBP7.73□□□□□ -1.17
LIG3-201ENST00000262327 KLK15Q9H2R5 256 aa7.73□□□□□ -1.17
LIG3-201ENST00000262327 IGKV3-7A0A075B6H7 116 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 B5MCH6 92 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 FXYD2P54710 66 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 SH2D6Q7Z4S9 175 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 M0R1W7 72 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 BUB3O43684 328 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 EFNA4P52798 201 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 TRAV40A0A0B4J280 105 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 SRSF1Q07955 248 aaKnown RBP eCLIP7.72□□□□□ -1.17
LIG3-201ENST00000262327 ZC2HC1BQ5TFG8 222 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 SAMD5Q5TGI4 173 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 Q8N6K4 173 aa7.72□□□□□ -1.17
LIG3-201ENST00000262327 CCDC140Q96MF4 163 aa7.71□□□□□ -1.17
LIG3-201ENST00000262327 ZFAND3Q9H8U3 227 aa7.71□□□□□ -1.17
LIG3-201ENST00000262327 ERG28Q9UKR5 140 aa7.71□□□□□ -1.17
LIG3-201ENST00000262327 TNFRSF18Q9Y5U5 241 aa7.71□□□□□ -1.17
LIG3-201ENST00000262327 AGRNO00468 2067 aa7.71□□□□□ -1.18
LIG3-201ENST00000262327 CLPSL1A2RUU4 121 aa7.71□□□□□ -1.18
LIG3-201ENST00000262327 INSL3P51460 131 aa7.71□□□□□ -1.18
LIG3-201ENST00000262327 ZNF502Q8TBZ5 544 aa7.71□□□□□ -1.18
LIG3-201ENST00000262327 H3BVH4 76 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 SPINK8P0C7L1 97 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 FCER1GP30273 86 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 SAA4P35542 130 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 GAGE5Q13069 117 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 GAGE6Q13070 117 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 ETDBQ3ZM63 59 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 HHLA3Q9XRX5 114 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 ID1P41134 155 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 RPL32P62910 135 aaKnown RBP7.7□□□□□ -1.18
LIG3-201ENST00000262327 C8orf86Q6ZUL3 223 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 OR9G4Q8NGQ1 327 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 MRPL35Q9NZE8 188 aaKnown RBP7.7□□□□□ -1.18
LIG3-201ENST00000262327 CSPG4Q6UVK1 2322 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 TRAV8-2A0A0B4J237 113 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 IGKCP01834 107 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 PRR9Q5T870 116 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 SPANXN1Q5VSR9 72 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 PSMG3-AS1Q96PY0 264 aa7.7□□□□□ -1.18
LIG3-201ENST00000262327 COX6B1P14854 86 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 TMEM78Q5T7P6 136 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 MAPKAPK5-AS1Q8N8E1 139 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
LIG3-201ENST00000262327 M0R381 172 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 LCNL1Q6ZST4 164 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 OR4X2Q8NGF9 303 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 GLMPQ8WWB7 406 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 C20orf78Q9BR46 151 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 CHAC1Q9BUX1 264 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 CFAP46Q8IYW2 2715 aa7.69□□□□□ -1.18
LIG3-201ENST00000262327 CUBNO60494 3623 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 CRYBG3Q68DQ2 2970 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 SCGB2A1O75556 95 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 LINC01559Q495D7 138 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 DPF1Q92782 380 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 SORL1Q92673 2214 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 TRBV25-1A0A075B6N4 114 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 FAM110DQ8TAY7 271 aaPredicted RBP7.68□□□□□ -1.18
LIG3-201ENST00000262327 CITED1Q99966 193 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 ANAPC13Q9BS18 74 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 SIRPDQ9H106 197 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 NXT2Q9NPJ8 142 aaKnown RBP7.68□□□□□ -1.18
LIG3-201ENST00000262327 CREBBPQ92793 2442 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 DOPEY2Q9Y3R5 2298 aa7.68□□□□□ -1.18
LIG3-201ENST00000262327 IGHV7-4-1A0A0J9YVY3 117 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 TRBV12-3P01733 135 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 AJUBAQ96IF1 538 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 C16orf92Q96LL3 132 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 SMIM13P0DJ93 91 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 ARL3P36405 182 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 RPL11P62913 178 aaKnown RBP7.67□□□□□ -1.18
LIG3-201ENST00000262327 C20orf173Q96LM9 149 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 METTL26Q96S19 204 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 BPESC1Q9GZL8 116 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 CELSR2Q9HCU4 2923 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 IGLV2-18A0A075B6J9 118 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 F6UB75 175 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 DPM2O94777 84 aa7.67□□□□□ -1.18
LIG3-201ENST00000262327 IGHV3-11P01762 117 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms