RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FABP5P3A8MUU1 101 aa12.97□□□□□ -0.33
SRSF1-201ENST00000258962 WIPF1O43516 503 aa12.97□□□□□ -0.33
SRSF1-201ENST00000258962 TMEM136Q6ZRR5 245 aa12.97□□□□□ -0.33
SRSF1-201ENST00000258962 ZNF575Q86XF7 245 aa12.97□□□□□ -0.33
SRSF1-201ENST00000258962 TMSB15BA0A087X1C1 80 aa12.96□□□□□ -0.33
SRSF1-201ENST00000258962 A0A0J9YX75 114 aa12.96□□□□□ -0.33
SRSF1-201ENST00000258962 KRTAP10-11P60412 298 aa12.96□□□□□ -0.33
SRSF1-201ENST00000258962 Q6ZQT7 251 aa12.96□□□□□ -0.33
SRSF1-201ENST00000258962 PGLYRP4Q96LB8 373 aa12.96□□□□□ -0.33
SRSF1-201ENST00000258962 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
SRSF1-201ENST00000258962 TRBV7-9A0A0J9YWB2 115 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 A0A1B0GXF2 115 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 APCSP02743 223 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 CRISP2P16562 243 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 HBBP68871 147 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 RIGQ13278 110 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 LINC01559Q495D7 138 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 APRG1Q8IVJ8 170 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 AGRNO00468 2067 aa12.95□□□□□ -0.34
SRSF1-201ENST00000258962 TRAV25A0A0B4J276 109 aa12.94□□□□□ -0.34
SRSF1-201ENST00000258962 J3KRW8 73 aa12.94□□□□□ -0.34
SRSF1-201ENST00000258962 SPAG8Q99932 426 aaPredicted RBP12.94□□□□□ -0.34
SRSF1-201ENST00000258962 SORL1Q92673 2214 aa12.94□□□□□ -0.34
SRSF1-201ENST00000258962 KIR3DS1Q14943 382 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 FOXI2Q6ZQN5 318 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 HIST3H2BBQ8N257 126 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 MRAPQ8TCY5 172 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 ZNF256Q9Y2P7 627 aaPredicted RBP12.93□□□□□ -0.34
SRSF1-201ENST00000258962 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 ORM1P02763 201 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 DEFB131AP59861 70 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 MAP6D1Q9H9H5 199 aa12.93□□□□□ -0.34
SRSF1-201ENST00000258962 A0A1B0GUT8 65 aa12.92□□□□□ -0.34
SRSF1-201ENST00000258962 KLLNB2CW77 178 aa12.92□□□□□ -0.34
SRSF1-201ENST00000258962 Q0VG73 95 aa12.92□□□□□ -0.34
SRSF1-201ENST00000258962 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
SRSF1-201ENST00000258962 OR4C46A6NHA9 309 aa12.91□□□□□ -0.34
SRSF1-201ENST00000258962 GPX1P07203 203 aa12.91□□□□□ -0.34
SRSF1-201ENST00000258962 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
SRSF1-201ENST00000258962 SMIM6P0DI80 62 aa12.91□□□□□ -0.34
SRSF1-201ENST00000258962 OR10J3Q5JRS4 329 aa12.91□□□□□ -0.34
SRSF1-201ENST00000258962 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
SRSF1-201ENST00000258962 KNCNA6PVL3 124 aa12.9□□□□□ -0.34
SRSF1-201ENST00000258962 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
SRSF1-201ENST00000258962 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
SRSF1-201ENST00000258962 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.34
SRSF1-201ENST00000258962 CAMPP49913 170 aa12.9□□□□□ -0.34
SRSF1-201ENST00000258962 ZNF124Q15973 351 aa12.9□□□□□ -0.34
SRSF1-201ENST00000258962 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.34
SRSF1-201ENST00000258962 TMEM18Q96B42 140 aa12.9□□□□□ -0.34
SRSF1-201ENST00000258962 TRAV21A0A0B4J279 112 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 GRIFINA4D1Z8 144 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 A8MTW9 85 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 IGKV3-20P01619 116 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 CTRLP40313 264 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 LYZL1Q6UWQ5 148 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 AMTNQ6UX39 209 aa12.89□□□□□ -0.35
SRSF1-201ENST00000258962 K7EIL1 84 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 LEPP41159 167 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 FER1L6-AS1Q8NA97 138 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 TPPP3Q9BW30 176 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 F2Z2F3 143 aa12.88□□□□□ -0.35
SRSF1-201ENST00000258962 RBMY1BA6NDE4 496 aaKnown RBP12.87□□□□□ -0.35
SRSF1-201ENST00000258962 RBMY1EA6NEQ0 496 aaKnown RBP12.87□□□□□ -0.35
SRSF1-201ENST00000258962 H3BMM0 161 aa12.87□□□□□ -0.35
SRSF1-201ENST00000258962 M0R2Z0 102 aa12.87□□□□□ -0.35
SRSF1-201ENST00000258962 RBMY1DP0C7P1 496 aaKnown RBP12.87□□□□□ -0.35
SRSF1-201ENST00000258962 SLAQ13239 276 aa12.87□□□□□ -0.35
SRSF1-201ENST00000258962 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-201ENST00000258962 C7orf71A4D174 169 aa12.86□□□□□ -0.35
SRSF1-201ENST00000258962 FABP4P15090 132 aa12.86□□□□□ -0.35
SRSF1-201ENST00000258962 GFI1BQ5VTD9 330 aa12.86□□□□□ -0.35
SRSF1-201ENST00000258962 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
SRSF1-201ENST00000258962 OR2K2Q8NGT1 345 aa12.86□□□□□ -0.35
SRSF1-201ENST00000258962 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
SRSF1-201ENST00000258962 ESDP10768 282 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 SPINK13Q1W4C9 94 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 KIAA1644Q3SXP7 199 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 ANXA2RQ3ZCQ2 193 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 PDZD11Q5EBL8 140 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 MUC21Q5SSG8 566 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 OR10D4PQ8NGN7 298 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 C12orf57Q99622 126 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 HIST1H2BLQ99880 126 aa12.85□□□□□ -0.35
SRSF1-201ENST00000258962 TRAV12-2A0A075B6T6 113 aa12.84□□□□□ -0.35
SRSF1-201ENST00000258962 MUC21A0A0G2JKD1 596 aa12.84□□□□□ -0.35
SRSF1-201ENST00000258962 MUC21A0A140T8X8 626 aa12.84□□□□□ -0.35
SRSF1-201ENST00000258962 ZNF324O75467 553 aaPredicted RBP12.84□□□□□ -0.35
SRSF1-201ENST00000258962 SRIP30626 198 aa12.84□□□□□ -0.35
SRSF1-201ENST00000258962 CDKN1BP46527 198 aa12.84□□□□□ -0.35
SRSF1-201ENST00000258962 PACRGQ96M98 296 aaPredicted RBP12.84□□□□□ -0.35
SRSF1-201ENST00000258962 CNFNQ9BYD5 112 aa12.84□□□□□ -0.35
SRSF1-201ENST00000258962 TRAV12-3A0A0B4J271 114 aa12.83□□□□□ -0.35
SRSF1-201ENST00000258962 TSPOP30536 169 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms