RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 C2CD3Q4AC94 2353 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 IGHV3OR16-13A0A075B7E8 117 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 IGHV3-74A0A0B4J1X5 117 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 TMEM8BA6NDV4 472 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 CIDEAO60543 219 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 Q8N6K4 173 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 C18orf15Q96N68 181 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 SORL1Q92673 2214 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 VWFP04275 2813 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 H3BUA1 57 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 SLC25A16P16260 332 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 LENEPQ9Y5L5 61 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 TRGV11A0A075B6L2 103 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 ZNF56Q15929 161 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 ZNF491Q8N8L2 437 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 MRAP2Q96G30 205 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.26
RPA1-201ENST00000254719 PLNP26678 52 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 KLF17Q5JT82 389 aaPredicted RBP7.15□□□□□ -1.27
RPA1-201ENST00000254719 ZNF48Q96MX3 618 aaPredicted RBP7.15□□□□□ -1.27
RPA1-201ENST00000254719 DUX5Q96PT3 197 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 CSTL1Q9H114 145 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 DPH3P1Q9H4G8 78 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 IGHV3-49A0A0A0MS15 119 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 RBAKDNA6NC62 111 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 H3BUT2 72 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 SAA4P35542 130 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 PRR25Q96S07 402 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 VCX2Q9H322 139 aa7.15□□□□□ -1.27
RPA1-201ENST00000254719 IGHV3-66A0A0C4DH42 116 aa7.14□□□□□ -1.27
RPA1-201ENST00000254719 CD5LO43866 347 aa7.14□□□□□ -1.27
RPA1-201ENST00000254719 ARMS2P0C7Q2 107 aa7.14□□□□□ -1.27
RPA1-201ENST00000254719 SFTA2Q6UW10 78 aa7.14□□□□□ -1.27
RPA1-201ENST00000254719 TRAV40A0A0B4J280 105 aa7.14□□□□□ -1.27
RPA1-201ENST00000254719 CMC4P56277 68 aaPredicted RBP7.14□□□□□ -1.27
RPA1-201ENST00000254719 CIRBPQ14011 172 aaKnown RBP7.14□□□□□ -1.27
RPA1-201ENST00000254719 MYO18BQ8IUG5 2567 aa7.14□□□□□ -1.27
RPA1-201ENST00000254719 SETXQ7Z333 2677 aaKnown RBP7.14□□□□□ -1.27
RPA1-201ENST00000254719 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
RPA1-201ENST00000254719 KLK9Q2XQG4 91 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 LGALS9BQ3B8N2 356 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 LGALS9CQ6DKI2 356 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 KLK9Q9UKQ9 250 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 IGHV3OR16-10A0A075B7F0 116 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 C19orf84I3L1E1 186 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 SMAD5-AS1Q9Y6J3 95 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 NDUFA4O00483 81 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 NDUFA3O95167 84 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 CITED1Q99966 193 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 TNFRSF18Q9Y5U5 241 aa7.13□□□□□ -1.27
RPA1-201ENST00000254719 IGHV1-69DA0A0B4J2H0 117 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 LINC01548A6NM66 108 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 IGHV1-69P01742 117 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 BPESC1Q9GZL8 116 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 SPCS1Q9Y6A9 102 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 SPG11Q96JI7 2443 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 IGHV3OR16-8A0A075B7F1 116 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 OR2K2Q8NGT1 345 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 KLK15Q9H2R5 256 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 NCR2O95944 276 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 AMN1Q8IY45 258 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
RPA1-201ENST00000254719 CHTOPQ9Y3Y2 248 aaKnown RBP7.12□□□□□ -1.27
RPA1-201ENST00000254719 ATP6V0E1O15342 81 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 TGFAP01135 160 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 IGHV3-11P01762 117 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 DEFB104AQ8WTQ1 72 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 DAZ1Q9NQZ3 744 aaKnown RBP7.11□□□□□ -1.27
RPA1-201ENST00000254719 H3BVH4 76 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 VCYO14598 125 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 Q8N8P6 123 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 GEMIN7Q9H840 131 aaKnown RBP7.11□□□□□ -1.27
RPA1-201ENST00000254719 IGLV11-55A0A075B6I3 123 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 CD7P09564 240 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 HTN1P15515 57 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 TMEM170BQ5T4T1 132 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 FAM74A4Q5TZK3 123 aa7.11□□□□□ -1.27
RPA1-201ENST00000254719 OTOGQ6ZRI0 2925 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 A0A096LNJ9 63 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 C2orf70A6NJV1 201 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 H3BUX3 64 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 TNFRSF6BO95407 300 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 IFI27P40305 119 aaPredicted RBP7.1□□□□□ -1.27
RPA1-201ENST00000254719 SRSF2Q01130 221 aaKnown RBP7.1□□□□□ -1.27
RPA1-201ENST00000254719 C19orf54Q5BKX5 351 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 IGHV1-24A0A0C4DH33 117 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 H3BRM9 83 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 J3QLI3 93 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 SIVA1O15304 175 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 Q6ZQT7 251 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 Q8TAT8 98 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 PIFOQ8TCI5 191 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 CHD6Q8TD26 2715 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 K7ERJ3 54 aa7.1□□□□□ -1.27
RPA1-201ENST00000254719 KIR3DS1Q14943 382 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms