RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 A0A087WW49 117 aa13.99□□□□□ -0.17
TUBA4A-201ENST00000248437 FLNBO75369 2602 aaKnown RBP13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 ANK3Q12955 4377 aaKnown RBP13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 SRD5A1P18405 259 aa13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 CACNG7P62955 275 aa13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 LAMTOR2Q9Y2Q5 125 aa13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 F6UB75 175 aa13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 DEFB1P60022 68 aa13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 SIGLEC8Q9NYZ4 499 aa13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 HSPB8Q9UJY1 196 aa13.98□□□□□ -0.17
TUBA4A-201ENST00000248437 HOXD3P31249 432 aaPredicted RBP13.97□□□□□ -0.17
TUBA4A-201ENST00000248437 IFI27P40305 119 aaPredicted RBP13.97□□□□□ -0.17
TUBA4A-201ENST00000248437 SYNJ2BPP57105 145 aa13.97□□□□□ -0.17
TUBA4A-201ENST00000248437 Q6ZQT7 251 aa13.97□□□□□ -0.17
TUBA4A-201ENST00000248437 MS4A6AQ9H2W1 248 aa13.97□□□□□ -0.17
TUBA4A-201ENST00000248437 OR10AG1Q8NH19 301 aa13.96□□□□□ -0.17
TUBA4A-201ENST00000248437 KLHDC1Q8N7A1 406 aa13.96□□□□□ -0.18
TUBA4A-201ENST00000248437 DUX5Q96PT3 197 aa13.96□□□□□ -0.18
TUBA4A-201ENST00000248437 SMR3AQ99954 134 aa13.96□□□□□ -0.18
TUBA4A-201ENST00000248437 SYS1-DBNDD2H3BUS1 97 aa13.95□□□□□ -0.18
TUBA4A-201ENST00000248437 SMIM15Q7Z3B0 74 aa13.95□□□□□ -0.18
TUBA4A-201ENST00000248437 MIEN1Q9BRT3 115 aa13.95□□□□□ -0.18
TUBA4A-201ENST00000248437 TCF21O43680 179 aa13.95□□□□□ -0.18
TUBA4A-201ENST00000248437 NPYP01303 97 aa13.95□□□□□ -0.18
TUBA4A-201ENST00000248437 SELENOKQ9Y6D0 94 aa13.95□□□□□ -0.18
TUBA4A-201ENST00000248437 KLLNB2CW77 178 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 J3KRW8 73 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 K7EQG2 157 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 MED14OSP0DP75 135 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 SNRPD3P62318 126 aaKnown RBP13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 SPATA45Q537H7 98 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 LINC00173Q6ZV60 143 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 WFDC3Q8IUB2 231 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 MAP1LC3CQ9BXW4 147 aa13.94□□□□□ -0.18
TUBA4A-201ENST00000248437 LOC389332A0A1B0GUA5 103 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 SMKR1H3BMG3 65 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 CD5LO43866 347 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 LBHQ53QV2 105 aaPredicted RBP13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 SPANXN1Q5VSR9 72 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 ODF3Q96PU9 254 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 C20orf202A1L168 122 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 H3BVH4 76 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 NCR2O95944 276 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 RNASE4P34096 147 aaKnown RBP13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 PET117Q6UWS5 81 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 YAE1D1Q9NRH1 226 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 MTORP42345 2549 aa13.93□□□□□ -0.18
TUBA4A-201ENST00000248437 SPATA12Q7Z6I5 190 aa13.92□□□□□ -0.18
TUBA4A-201ENST00000248437 MAP1LC3AQ9H492 121 aa13.92□□□□□ -0.18
TUBA4A-201ENST00000248437 EVI2AP22794 236 aa13.92□□□□□ -0.18
TUBA4A-201ENST00000248437 ASIPP42127 132 aa13.92□□□□□ -0.18
TUBA4A-201ENST00000248437 ANXA2RQ3ZCQ2 193 aa13.92□□□□□ -0.18
TUBA4A-201ENST00000248437 TRAV9-2A0A087WT02 112 aa13.91□□□□□ -0.18
TUBA4A-201ENST00000248437 ZNF705AQ6ZN79 300 aaPredicted RBP13.91□□□□□ -0.18
TUBA4A-201ENST00000248437 C4orf3Q8WVX3 66 aa13.91□□□□□ -0.18
TUBA4A-201ENST00000248437 ZNF747Q9BV97 191 aa13.91□□□□□ -0.18
TUBA4A-201ENST00000248437 A0A096LNJ9 63 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 LINC01546A6NGU7 62 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 ZNF688P0C7X2 276 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 PSMG4Q5JS54 123 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 TNFRSF6BO95407 300 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 S100A4P26447 101 aaKnown RBP13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 TFPI2P48307 235 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 ATOH7Q8N100 152 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 SCRT2Q9NQ03 307 aa13.9□□□□□ -0.18
TUBA4A-201ENST00000248437 A0A0J9YX75 114 aa13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 DNAJC9-AS1A6NH13 148 aa13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 LINC01619G3V211 115 aa13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 KIR3DS1Q14943 382 aa13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 MRPL52Q86TS9 123 aaKnown RBP13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 OR4C46A6NHA9 309 aa13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 LEPP41159 167 aa13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 Q6ZSV7 163 aa13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 NXT2Q9NPJ8 142 aaKnown RBP13.89□□□□□ -0.19
TUBA4A-201ENST00000248437 HBDP02042 147 aa13.88□□□□□ -0.19
TUBA4A-201ENST00000248437 IGLC3P0DOY3 106 aa13.88□□□□□ -0.19
TUBA4A-201ENST00000248437 TCTEX1D4Q5JR98 221 aa13.88□□□□□ -0.19
TUBA4A-201ENST00000248437 C18orf65Q6ZTR6 163 aa13.88□□□□□ -0.19
TUBA4A-201ENST00000248437 DEFB125Q8N687 156 aa13.88□□□□□ -0.19
TUBA4A-201ENST00000248437 SLURP1P55000 103 aa13.88□□□□□ -0.19
TUBA4A-201ENST00000248437 UQCR10Q9UDW1 63 aa13.88□□□□□ -0.19
TUBA4A-201ENST00000248437 PRSS47A8MTI9 375 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 GAS8-AS1O95177 125 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 DEFB136Q30KP8 78 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 LINC01545Q5VT33 79 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 WFDC12Q8WWY7 111 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 C2orf88Q9BSF0 95 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 PEMTQ9UBM1 199 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 PHLDA3Q9Y5J5 127 aa13.87□□□□□ -0.19
TUBA4A-201ENST00000248437 OR11H1Q8NG94 326 aa13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 OR2K2Q8NGT1 345 aa13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 DPF1Q92782 380 aa13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 DUSP14O95147 198 aaKnown RBP13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 RNASE3P12724 160 aaKnown RBP13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 MAJINQ3KP22 176 aa13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 FAM159AQ6UWV7 190 aa13.86□□□□□ -0.19
TUBA4A-201ENST00000248437 C7orf71A4D174 169 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms