RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 FBLL1A6NHQ2 334 aaKnown RBP13.47□□□□□ -0.25
CBX1-201ENST00000225603 F6UB75 175 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 KRTDAPP60985 99 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 COX8CQ7Z4L0 72 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 NIT1Q86X76 327 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 KIR2DL5AQ8N109 375 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 FAM19A2Q8N3H0 131 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 Q8TAT8 98 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 STAB1Q9NY15 2570 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 ID1P41134 155 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 A0A1B0GUT8 65 aa13.46□□□□□ -0.25
CBX1-201ENST00000225603 NTF3P20783 257 aa13.46□□□□□ -0.25
CBX1-201ENST00000225603 PSMG4Q5JS54 123 aa13.46□□□□□ -0.25
CBX1-201ENST00000225603 SAPCD1Q5SSQ6 148 aa13.46□□□□□ -0.25
CBX1-201ENST00000225603 TMEM158Q8WZ71 300 aa13.46□□□□□ -0.25
CBX1-201ENST00000225603 NDUFAF3Q9BU61 184 aa13.46□□□□□ -0.25
CBX1-201ENST00000225603 AGPAT4-IT1Q9H0P7 198 aa13.46□□□□□ -0.25
CBX1-201ENST00000225603 C3orf56Q8N813 242 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 Q8N976 141 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 PRR25Q96S07 402 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 COL6A5A8TX70 2615 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 LOC102724200A0A096LPH7 203 aaPredicted RBP13.45□□□□□ -0.26
CBX1-201ENST00000225603 SH2D1AO60880 128 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 ARMS2P0C7Q2 107 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 RIGQ13278 110 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 SAMD13Q5VXD3 122 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 Q6AWC8 147 aa13.45□□□□□ -0.26
CBX1-201ENST00000225603 HSBP1O75506 76 aa13.44□□□□□ -0.26
CBX1-201ENST00000225603 FAM162BQ5T6X4 162 aa13.44□□□□□ -0.26
CBX1-201ENST00000225603 RNASEKQ6P5S7 137 aaKnown RBP13.44□□□□□ -0.26
CBX1-201ENST00000225603 C12orf54Q6X4T0 127 aa13.44□□□□□ -0.26
CBX1-201ENST00000225603 ZNF256Q9Y2P7 627 aaPredicted RBP13.44□□□□□ -0.26
CBX1-201ENST00000225603 TRRAPQ9Y4A5 3859 aa13.44□□□□□ -0.26
CBX1-201ENST00000225603 RBAKDNA6NC62 111 aa13.44□□□□□ -0.26
CBX1-201ENST00000225603 IGLV1-51P01701 117 aa13.44□□□□□ -0.26
CBX1-201ENST00000225603 SNRPD3P62318 126 aaKnown RBP13.44□□□□□ -0.26
CBX1-201ENST00000225603 TDRG1Q3Y452 100 aa13.44□□□□□ -0.26
CBX1-201ENST00000225603 TRAV25A0A0B4J276 109 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 GATD1Q8NB37 220 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 URB1-AS1Q96HZ7 61 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 NOTCH3Q9UM47 2321 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 A0A1B0GW15 77 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 TMEM189A5PLL7 270 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 C3orf79P0CE67 100 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 C9orf47Q6ZRZ4 202 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 OR8A1Q8NGG7 326 aa13.43□□□□□ -0.26
CBX1-201ENST00000225603 SPAG8Q99932 426 aaPredicted RBP13.43□□□□□ -0.26
CBX1-201ENST00000225603 TRAV2A0A0B4J234 112 aa13.42□□□□□ -0.26
CBX1-201ENST00000225603 BORCS7Q96B45 105 aa13.42□□□□□ -0.26
CBX1-201ENST00000225603 TPPP3Q9BW30 176 aa13.42□□□□□ -0.26
CBX1-201ENST00000225603 M0R2Z0 102 aa13.41□□□□□ -0.26
CBX1-201ENST00000225603 HIST1H1AQ02539 215 aaPredicted RBP13.41□□□□□ -0.26
CBX1-201ENST00000225603 VAMP8Q9BV40 100 aa13.41□□□□□ -0.26
CBX1-201ENST00000225603 DEFB131AP59861 70 aa13.41□□□□□ -0.26
CBX1-201ENST00000225603 ZNF124Q15973 351 aa13.41□□□□□ -0.26
CBX1-201ENST00000225603 TMSB15BA0A087X1C1 80 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 SHISA2Q6UWI4 295 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 OR10J6PQ8NGY7 276 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 C20orf144Q9BQM9 153 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 OR4C46A6NHA9 309 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 ZNF80P51504 273 aaPredicted RBP13.4□□□□□ -0.26
CBX1-201ENST00000225603 ZNF138P52744 262 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 TMEM78Q5T7P6 136 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 PAM16Q9Y3D7 125 aa13.4□□□□□ -0.26
CBX1-201ENST00000225603 LYZL1Q6UWQ5 148 aa13.39□□□□□ -0.27
CBX1-201ENST00000225603 CHCHD1Q96BP2 118 aaKnown RBP13.39□□□□□ -0.27
CBX1-201ENST00000225603 MAP6D1Q9H9H5 199 aa13.39□□□□□ -0.27
CBX1-201ENST00000225603 AGRNO00468 2067 aa13.38□□□□□ -0.27
CBX1-201ENST00000225603 A0A0J9YX75 114 aa13.38□□□□□ -0.27
CBX1-201ENST00000225603 KNCNA6PVL3 124 aa13.38□□□□□ -0.27
CBX1-201ENST00000225603 WFDC9Q8NEX5 89 aa13.38□□□□□ -0.27
CBX1-201ENST00000225603 LINC00477Q96M19 166 aa13.38□□□□□ -0.27
CBX1-201ENST00000225603 RPS20P60866 119 aaKnown RBP13.37□□□□□ -0.27
CBX1-201ENST00000225603 ODF3L2Q3SX64 289 aa13.37□□□□□ -0.27
CBX1-201ENST00000225603 ZNF493Q6ZR52 646 aa13.37□□□□□ -0.27
CBX1-201ENST00000225603 APRG1Q8IVJ8 170 aa13.37□□□□□ -0.27
CBX1-201ENST00000225603 EBLN2Q6P2I7 272 aa13.37□□□□□ -0.27
CBX1-201ENST00000225603 LURAP1LQ8IV03 231 aa13.37□□□□□ -0.27
CBX1-201ENST00000225603 OR2K2Q8NGT1 345 aa13.37□□□□□ -0.27
CBX1-201ENST00000225603 PPP1R14DQ9NXH3 145 aa13.37□□□□□ -0.27
CBX1-201ENST00000225603 LINC00614P0C842 121 aa13.36□□□□□ -0.27
CBX1-201ENST00000225603 IGHV1-24A0A0C4DH33 117 aa13.36□□□□□ -0.27
CBX1-201ENST00000225603 IGKV3-20P01619 116 aa13.36□□□□□ -0.27
CBX1-201ENST00000225603 FOXI2Q6ZQN5 318 aa13.36□□□□□ -0.27
CBX1-201ENST00000225603 FAM19A4Q96LR4 140 aa13.36□□□□□ -0.27
CBX1-201ENST00000225603 MDFIQ99750 246 aa13.36□□□□□ -0.27
CBX1-201ENST00000225603 IGLL1P15814 213 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 CTRLP40313 264 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 KIR3DS1Q14943 382 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 PMCHL1Q16048 86 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 PRR9Q5T870 116 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 C9orf66Q5T8R8 295 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 CD7P09564 240 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 BTF3P20290 206 aaKnown RBP13.35□□□□□ -0.27
CBX1-201ENST00000225603 BEAN1Q3B7T3 259 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 LBHQ53QV2 105 aaPredicted RBP13.35□□□□□ -0.27
CBX1-201ENST00000225603 DMRTA1Q5VZB9 504 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 Q6ZQT7 251 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 ZFAND2AQ8N6M9 145 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms