RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
TIMP1-201ENST00000218388 SNURFLB1AK76 121 aa9.5□□□□□ -0.89
TIMP1-201ENST00000218388 B4DEV8 164 aa9.5□□□□□ -0.89
TIMP1-201ENST00000218388 ZNF415Q09FC8 603 aa9.5□□□□□ -0.89
TIMP1-201ENST00000218388 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
TIMP1-201ENST00000218388 IBA57Q5T440 356 aaKnown RBP9.5□□□□□ -0.89
TIMP1-201ENST00000218388 Q6ZQT7 251 aa9.5□□□□□ -0.89
TIMP1-201ENST00000218388 LINC01551Q86U37 167 aa9.5□□□□□ -0.89
TIMP1-201ENST00000218388 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
TIMP1-201ENST00000218388 TEX48A0A1B0GUV7 120 aa9.49□□□□□ -0.89
TIMP1-201ENST00000218388 TMEM218A2RU14 115 aa9.49□□□□□ -0.89
TIMP1-201ENST00000218388 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
TIMP1-201ENST00000218388 M0R036 132 aa9.49□□□□□ -0.89
TIMP1-201ENST00000218388 P01737 135 aa9.49□□□□□ -0.89
TIMP1-201ENST00000218388 OR5I1Q13606 314 aa9.49□□□□□ -0.89
TIMP1-201ENST00000218388 NDUFA5Q16718 116 aa9.49□□□□□ -0.89
TIMP1-201ENST00000218388 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 PRKDCP78527 4128 aaKnown RBP9.48□□□□□ -0.89
TIMP1-201ENST00000218388 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 C19orf71A6NCJ1 209 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 F8W036 122 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 K7EN84 100 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 TYMSP04818 313 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 AZU1P20160 251 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 S100A4P26447 101 aaKnown RBP9.48□□□□□ -0.89
TIMP1-201ENST00000218388 ASIPP42127 132 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 EMP1P54849 157 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 RPS20P60866 119 aaKnown RBP9.48□□□□□ -0.89
TIMP1-201ENST00000218388 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
TIMP1-201ENST00000218388 ADIRFQ15847 76 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 TP53TG3Q9ULZ0 132 aa9.48□□□□□ -0.89
TIMP1-201ENST00000218388 TIMM8BQ9Y5J9 83 aaPredicted RBP9.48□□□□□ -0.89
TIMP1-201ENST00000218388 A0A0J9YWU9 116 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 KRBOX1C9JBD0 128 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 DEFB4AO15263 64 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 PRM2P04554 102 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 CXCL1P09341 107 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 TCL1AP56279 114 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 ERVFC1-1P60608 527 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 RPL23P62829 140 aaKnown RBP9.47□□□□□ -0.89
TIMP1-201ENST00000218388 FAM231DQ6ZW35 169 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 C15orf54Q8N8G6 183 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 OR2D3Q8NGH3 330 aa9.47□□□□□ -0.89
TIMP1-201ENST00000218388 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 LYRM9A8MSI8 78 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 GNRH2O43555 120 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 C11orf72Q8NBR9 251 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 NUDT10Q8NFP7 164 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 ISOC2Q96AB3 205 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 NUDT11Q96G61 164 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 SPXQ9BT56 116 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 SEC11CQ9BY50 192 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.9
TIMP1-201ENST00000218388 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.9
TIMP1-201ENST00000218388 GSN-AS1Q9NRJ2 163 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.9
TIMP1-201ENST00000218388 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
TIMP1-201ENST00000218388 CXorf65A6NEN9 183 aa9.45□□□□□ -0.9
TIMP1-201ENST00000218388 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
TIMP1-201ENST00000218388 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
TIMP1-201ENST00000218388 DNLZQ5SXM8 178 aa9.45□□□□□ -0.9
TIMP1-201ENST00000218388 NOP10Q9NPE3 64 aaKnown RBP9.45□□□□□ -0.9
TIMP1-201ENST00000218388 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
TIMP1-201ENST00000218388 MDFICQ9P1T7 246 aa9.45□□□□□ -0.9
TIMP1-201ENST00000218388 PLAC8L1A1L4L8 177 aa9.44□□□□□ -0.9
TIMP1-201ENST00000218388 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
TIMP1-201ENST00000218388 CT83Q5H943 113 aa9.44□□□□□ -0.9
TIMP1-201ENST00000218388 FAM222AQ5U5X8 452 aa9.44□□□□□ -0.9
TIMP1-201ENST00000218388 IL17DQ8TAD2 202 aa9.44□□□□□ -0.9
TIMP1-201ENST00000218388 SFRP2Q96HF1 295 aa9.44□□□□□ -0.9
TIMP1-201ENST00000218388 IL36BQ9NZH7 164 aa9.44□□□□□ -0.9
TIMP1-201ENST00000218388 DKK2Q9UBU2 259 aa9.44□□□□□ -0.9
TIMP1-201ENST00000218388 GRIFINA4D1Z8 144 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 A8MWL6 223 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 H3BVH4 76 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 M0R2P5 195 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 ADCYAP1P18509 176 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 OR10G8Q8NGN5 311 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 C9orf85Q96MD7 179 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
TIMP1-201ENST00000218388 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
TIMP1-201ENST00000218388 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
TIMP1-201ENST00000218388 A0A1W2PPQ1 181 aa9.42□□□□□ -0.9
TIMP1-201ENST00000218388 PPP1R2P9O14990 202 aa9.42□□□□□ -0.9
TIMP1-201ENST00000218388 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
TIMP1-201ENST00000218388 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
TIMP1-201ENST00000218388 DAD1P61803 113 aa9.42□□□□□ -0.9
TIMP1-201ENST00000218388 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
TIMP1-201ENST00000218388 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
TIMP1-201ENST00000218388 SPINK4O60575 86 aa9.41□□□□□ -0.9
TIMP1-201ENST00000218388 C10orf91Q5T1B1 145 aa9.41□□□□□ -0.9
TIMP1-201ENST00000218388 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
TIMP1-201ENST00000218388 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
TIMP1-201ENST00000218388 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms