RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 TRAV9-1A0A075B6T8 112 aa13.11□□□□□ -0.31
PHGDH-232ENST00000641947 HIGD1CA8MV81 97 aa13.11□□□□□ -0.31
PHGDH-232ENST00000641947 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
PHGDH-232ENST00000641947 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
PHGDH-232ENST00000641947 RBPMS2Q6ZRY4 209 aaKnown RBP13.11□□□□□ -0.31
PHGDH-232ENST00000641947 ZFAND2AQ8N6M9 145 aa13.11□□□□□ -0.31
PHGDH-232ENST00000641947 BTF3L4Q96K17 158 aa13.11□□□□□ -0.31
PHGDH-232ENST00000641947 SIGLEC8Q9NYZ4 499 aa13.11□□□□□ -0.31
PHGDH-232ENST00000641947 C11orf21Q9P2W6 132 aa13.1□□□□□ -0.31
PHGDH-232ENST00000641947 A0A0J9YX75 114 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 A8MWL6 223 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 PAFAH1B2P68402 229 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 CITED1Q99966 193 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 ZNF256Q9Y2P7 627 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-232ENST00000641947 LENEPQ9Y5L5 61 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 CMYA5Q8N3K9 4069 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 TMSB15BA0A087X1C1 80 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 C1orf196B1AJZ1 125 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 J3KRW8 73 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 ZNF124Q15973 351 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 MRPL54Q6P161 138 aaKnown RBP13.09□□□□□ -0.31
PHGDH-232ENST00000641947 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 NAT8BQ9UHF3 227 aa13.09□□□□□ -0.31
PHGDH-232ENST00000641947 LINC00482Q8N8I6 264 aa13.08□□□□□ -0.32
PHGDH-232ENST00000641947 GFRA4Q9GZZ7 299 aa13.08□□□□□ -0.32
PHGDH-232ENST00000641947 KRTAP24-1Q3LI83 254 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 ACTL10Q5JWF8 245 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 FRZBQ92765 325 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 PGLYRP4Q96LB8 373 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 SAV1Q9H4B6 383 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-232ENST00000641947 TMEM189A5PLL7 270 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 FABP5P3A8MUU1 101 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 SAP30O75446 220 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 CRISP2P16562 243 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 DEFB131AP59861 70 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 APRG1Q8IVJ8 170 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 MAP6D1Q9H9H5 199 aa13.07□□□□□ -0.32
PHGDH-232ENST00000641947 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
PHGDH-232ENST00000641947 RAB5BP61020 215 aa13.06□□□□□ -0.32
PHGDH-232ENST00000641947 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-232ENST00000641947 TRAV25A0A0B4J276 109 aa13.05□□□□□ -0.32
PHGDH-232ENST00000641947 IGKV3D-20A0A0C4DH25 116 aa13.05□□□□□ -0.32
PHGDH-232ENST00000641947 IGKV3-20P01619 116 aa13.05□□□□□ -0.32
PHGDH-232ENST00000641947 FOXA3P55318 350 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-232ENST00000641947 LINC01559Q495D7 138 aa13.05□□□□□ -0.32
PHGDH-232ENST00000641947 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
PHGDH-232ENST00000641947 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
PHGDH-232ENST00000641947 A0A1B0GXF2 115 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 FAM231BA6NCW3 169 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 IGLV1-51P01701 117 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 ORM1P02763 201 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 PF4P02776 101 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 FABP9Q0Z7S8 132 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 ODF3L2Q3SX64 289 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 PRR31Q5SQ13 230 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 TMEM136Q6ZRR5 245 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 TRBV7-9A0A0J9YWB2 115 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 KLLNB2CW77 178 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BKO60814 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BJP06899 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 TRGC1P0CF51 173 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BOP23527 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BBP33778 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BDP58876 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BCP62807 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST2H2BEQ16778 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-232ENST00000641947 AMTNQ6UX39 209 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BHQ93079 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BNQ99877 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 HIST1H2BMQ99879 126 aa13.04□□□□□ -0.32
PHGDH-232ENST00000641947 LOC105371267A0A1B0GV96 52 aa13.03□□□□□ -0.32
PHGDH-232ENST00000641947 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
PHGDH-232ENST00000641947 OR4C46A6NHA9 309 aa13.03□□□□□ -0.32
PHGDH-232ENST00000641947 SNURFLB1AK76 121 aa13.03□□□□□ -0.32
PHGDH-232ENST00000641947 RNASE4P34096 147 aaKnown RBP13.03□□□□□ -0.32
PHGDH-232ENST00000641947 EBLN2Q6P2I7 272 aa13.03□□□□□ -0.32
PHGDH-232ENST00000641947 TRAPPC1Q9Y5R8 145 aa13.03□□□□□ -0.32
PHGDH-232ENST00000641947 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.32
PHGDH-232ENST00000641947 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.32
PHGDH-232ENST00000641947 GPX1P07203 203 aa13.02□□□□□ -0.32
PHGDH-232ENST00000641947 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.32
PHGDH-232ENST00000641947 ARMS2P0C7Q2 107 aa13.02□□□□□ -0.32
PHGDH-232ENST00000641947 ODF3Q96PU9 254 aa13.02□□□□□ -0.32
PHGDH-232ENST00000641947 A8MTW9 85 aa13.02□□□□□ -0.33
PHGDH-232ENST00000641947 M0R2Z0 102 aa13.02□□□□□ -0.33
PHGDH-232ENST00000641947 IGLC6P0CF74 106 aa13.02□□□□□ -0.33
PHGDH-232ENST00000641947 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
PHGDH-232ENST00000641947 Q6AWC8 147 aa13.02□□□□□ -0.33
PHGDH-232ENST00000641947 GNB1LQ9BYB4 327 aa13.02□□□□□ -0.33
PHGDH-232ENST00000641947 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
PHGDH-232ENST00000641947 H3BMM0 161 aa13.01□□□□□ -0.33
PHGDH-232ENST00000641947 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
PHGDH-232ENST00000641947 ATP5L2Q7Z4Y8 100 aa13.01□□□□□ -0.33
PHGDH-232ENST00000641947 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
PHGDH-232ENST00000641947 MRPL18Q9H0U6 180 aaKnown RBP13.01□□□□□ -0.33
PHGDH-232ENST00000641947 STAB1Q9NY15 2570 aa13□□□□□ -0.33
PHGDH-232ENST00000641947 TRAV12-2A0A075B6T6 113 aa13□□□□□ -0.33
PHGDH-232ENST00000641947 MUC21A0A0G2JKD1 596 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms