RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 GAGE12GP0CL81 117 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 GAGE12IP0CL82 117 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 GCHFRP30047 84 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 Q6ZQT7 251 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 GOLT1AQ6ZVE7 132 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 UBE2DNLQ8IWF7 75 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 SUN5Q8TC36 379 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
PHGDH-231ENST00000641939 CXorf1O96002 111 aa10.56□□□□□ -0.72
PHGDH-231ENST00000641939 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
PHGDH-231ENST00000641939 Q6ZTI0 123 aa10.56□□□□□ -0.72
PHGDH-231ENST00000641939 ST6GAL2Q96JF0 529 aa10.56□□□□□ -0.72
PHGDH-231ENST00000641939 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
PHGDH-231ENST00000641939 BIRC6Q9NR09 4857 aa10.55□□□□□ -0.72
PHGDH-231ENST00000641939 TCL1AP56279 114 aa10.55□□□□□ -0.72
PHGDH-231ENST00000641939 GNG5P63218 68 aa10.55□□□□□ -0.72
PHGDH-231ENST00000641939 RNF212Q495C1 297 aa10.55□□□□□ -0.72
PHGDH-231ENST00000641939 SSX7Q7RTT5 188 aa10.55□□□□□ -0.72
PHGDH-231ENST00000641939 ARPC5LQ9BPX5 153 aa10.55□□□□□ -0.72
PHGDH-231ENST00000641939 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
PHGDH-231ENST00000641939 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 CTXND1A0A1B0GTU2 59 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 OR5I1Q13606 314 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 AKR1C8PQ5T2L2 129 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 Q6AWC8 147 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 C5orf17Q8NAS9 161 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 CYTL1Q9NRR1 136 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 KLF12Q9Y4X4 402 aa10.54□□□□□ -0.72
PHGDH-231ENST00000641939 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 TRAV8-1A0A0A6YYK1 113 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 SERTM2A0A1B0GWG4 89 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 SPINK4O60575 86 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 NUDT3O95989 172 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 ZNF726P1Q15940 193 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 IQCF2Q8IXL9 164 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 TMPRSS5Q9H3S3 457 aa10.53□□□□□ -0.72
PHGDH-231ENST00000641939 TCRAP04437 139 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 HOXA5P20719 270 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 SUMO1P63165 101 aaKnown RBP10.52□□□□□ -0.73
PHGDH-231ENST00000641939 ZNF415Q09FC8 603 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 ZNF345Q14585 488 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 MUC21Q5SSG8 566 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 KCNRGQ8N5I3 272 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 C18orf15Q96N68 181 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 ATG101Q9BSB4 218 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 TREM1Q9NP99 234 aa10.52□□□□□ -0.73
PHGDH-231ENST00000641939 TRAV26-1A0A087WT03 109 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 A0A1W2PRE2 83 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 HMSDA8MTL9 139 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 K7EQM0 130 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 FAM3BP58499 235 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-231ENST00000641939 LGALS9BQ3B8N2 356 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 FAM159AQ6UWV7 190 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 OR11H4Q8NGC9 324 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 TVP23CQ96ET8 276 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
PHGDH-231ENST00000641939 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
PHGDH-231ENST00000641939 F6UZH7 168 aa10.5□□□□□ -0.73
PHGDH-231ENST00000641939 SGK494Q96LW2 274 aa10.5□□□□□ -0.73
PHGDH-231ENST00000641939 NDFIP1Q9BT67 221 aa10.5□□□□□ -0.73
PHGDH-231ENST00000641939 TRGV11A0A075B6L2 103 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 A0A0D9SG52 128 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 A0A0J9YY99 117 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 M0R2N4 97 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 CCL18P55774 89 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 TMEM183BQ1AE95 376 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 TDRG1Q3Y452 100 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 CYB561D1Q8N8Q1 229 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
PHGDH-231ENST00000641939 MDFICQ9P1T7 246 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 NAGKQ9UJ70 344 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 PSG8Q9UQ74 426 aa10.49□□□□□ -0.73
PHGDH-231ENST00000641939 FAT2Q9NYQ8 4349 aa10.48□□□□□ -0.73
PHGDH-231ENST00000641939 DNAH17Q9UFH2 4485 aa10.48□□□□□ -0.73
PHGDH-231ENST00000641939 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
PHGDH-231ENST00000641939 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
PHGDH-231ENST00000641939 H3BNG1 76 aa10.48□□□□□ -0.73
PHGDH-231ENST00000641939 FGF8P55075 233 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-231ENST00000641939 TMEM75Q8N9X5 138 aa10.48□□□□□ -0.73
PHGDH-231ENST00000641939 SPXQ9BT56 116 aa10.48□□□□□ -0.73
PHGDH-231ENST00000641939 MAP1LC3B2A6NCE7 125 aa10.47□□□□□ -0.73
PHGDH-231ENST00000641939 IGLV2-11P01706 119 aa10.47□□□□□ -0.73
PHGDH-231ENST00000641939 UBE2G2P60604 165 aa10.47□□□□□ -0.73
PHGDH-231ENST00000641939 FLI1Q01543 452 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-231ENST00000641939 PRNTQ86SH4 94 aa10.47□□□□□ -0.73
PHGDH-231ENST00000641939 NKX6-2Q9C056 277 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-231ENST00000641939 MAP1LC3BQ9GZQ8 125 aa10.47□□□□□ -0.73
PHGDH-231ENST00000641939 KANTRA0A1W2PQU2 76 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 FAM74A7A6NL05 159 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 BCL2L11O43521 198 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 GNRH2O43555 120 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 IFNA7P01567 189 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 IGHV3-53P01767 116 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 SEC11BP0C7V7 166 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 Q6ZR54 194 aa10.46□□□□□ -0.73
PHGDH-231ENST00000641939 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms