RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 AP5S1Q9NUS5 200 aa12.92□□□□□ -0.34
PHGDH-229ENST00000641891 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.92□□□□□ -0.349e-8■□□□□ 11
PHGDH-229ENST00000641891 IGLC3P0DOY3 106 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 EDN2P20800 178 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 FA2HQ7L5A8 372 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 NPFFR1Q9GZQ6 430 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 SIGLEC8Q9NYZ4 499 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 TM4SF20Q53R12 229 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 PRR9Q5T870 116 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 C9orf139Q6ZV77 190 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 ORMDL3Q8N138 153 aa12.91□□□□□ -0.34
PHGDH-229ENST00000641891 RNF223E7ERA6 249 aa12.9□□□□□ -0.34
PHGDH-229ENST00000641891 H0Y8G0 127 aa12.9□□□□□ -0.34
PHGDH-229ENST00000641891 SOCS3O14543 225 aa12.9□□□□□ -0.34
PHGDH-229ENST00000641891 TRAV9-2A0A087WT02 112 aa12.9□□□□□ -0.34
PHGDH-229ENST00000641891 J3KRW8 73 aa12.9□□□□□ -0.34
PHGDH-229ENST00000641891 CRXO43186 299 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-229ENST00000641891 RPL11P62913 178 aaKnown RBP12.9□□□□□ -0.34
PHGDH-229ENST00000641891 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-229ENST00000641891 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
PHGDH-229ENST00000641891 GAS8-AS1O95177 125 aa12.89□□□□□ -0.35
PHGDH-229ENST00000641891 NPYP01303 97 aa12.89□□□□□ -0.35
PHGDH-229ENST00000641891 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
PHGDH-229ENST00000641891 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
PHGDH-229ENST00000641891 CNFNQ9BYD5 112 aa12.89□□□□□ -0.35
PHGDH-229ENST00000641891 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 IGLL1P15814 213 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 CKS2P33552 79 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 FXYD7P58549 80 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 UQCR10Q9UDW1 63 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 A0A096LNJ9 63 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 RHPN1-AS1Q9BWJ2 59 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 TMEM191AQ9H0A3 160 aa12.88□□□□□ -0.35
PHGDH-229ENST00000641891 SRD5A1P18405 259 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 Q6ZN92 141 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 LINC00469Q8N7U9 141 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 MAP1LC3CQ9BXW4 147 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 ZMAT5Q9UDW3 170 aaKnown RBP12.87□□□□□ -0.35
PHGDH-229ENST00000641891 HSPB8Q9UJY1 196 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-229ENST00000641891 CSPG4Q6UVK1 2322 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 POLQO75417 2590 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 ANKRD17O75179 2603 aaKnown RBP12.87□□□□□ -0.35
PHGDH-229ENST00000641891 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 F6UB75 175 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 BATFQ16520 125 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 PMCHL2Q9BQD1 86 aa12.87□□□□□ -0.35
PHGDH-229ENST00000641891 hDV102S1A0JD36 115 aa12.86□□□□□ -0.35
PHGDH-229ENST00000641891 PSMB8P28062 276 aa12.86□□□□□ -0.35
PHGDH-229ENST00000641891 NUTF2P61970 127 aaKnown RBP12.86□□□□□ -0.35
PHGDH-229ENST00000641891 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
PHGDH-229ENST00000641891 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
PHGDH-229ENST00000641891 TP73-AS1Q9UF72 201 aa12.86□□□□□ -0.35
PHGDH-229ENST00000641891 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
PHGDH-229ENST00000641891 ZNF747Q9BV97 191 aa12.86□□□□□ -0.35
PHGDH-229ENST00000641891 PPP1R14DQ9NXH3 145 aa12.86□□□□□ -0.35
PHGDH-229ENST00000641891 J3QLI3 93 aa12.85□□□□□ -0.35
PHGDH-229ENST00000641891 IGHV4-31P0DP07 118 aa12.85□□□□□ -0.35
PHGDH-229ENST00000641891 DAZ1Q9NQZ3 744 aaKnown RBP12.85□□□□□ -0.35
PHGDH-229ENST00000641891 C20orf202A1L168 122 aa12.84□□□□□ -0.35
PHGDH-229ENST00000641891 GATA1P15976 413 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-229ENST00000641891 HNRNPA3P51991 378 aaKnown RBP12.84□□□□□ -0.35
PHGDH-229ENST00000641891 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
PHGDH-229ENST00000641891 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
PHGDH-229ENST00000641891 ZANQ9Y493 2812 aa12.84□□□□□ -0.35
PHGDH-229ENST00000641891 PET117Q6UWS5 81 aa12.84□□□□□ -0.35
PHGDH-229ENST00000641891 EVI2AP22794 236 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 CYB5R2Q6BCY4 276 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 MRPL52Q86TS9 123 aaKnown RBP12.83□□□□□ -0.36
PHGDH-229ENST00000641891 SMPXQ9UHP9 88 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 CR1P17927 2039 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 OVOL1O14753 267 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 LINC00477Q96M19 166 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 ZNF580Q9UK33 172 aa12.83□□□□□ -0.36
PHGDH-229ENST00000641891 H3BVH4 76 aa12.82□□□□□ -0.36
PHGDH-229ENST00000641891 SPRY2O43597 315 aa12.82□□□□□ -0.36
PHGDH-229ENST00000641891 RPLP1P05386 114 aaKnown RBP12.82□□□□□ -0.36
PHGDH-229ENST00000641891 OR8A1Q8NGG7 326 aa12.82□□□□□ -0.36
PHGDH-229ENST00000641891 FSHBP01225 129 aa12.81□□□□□ -0.36
PHGDH-229ENST00000641891 TSPOP30536 169 aa12.81□□□□□ -0.36
PHGDH-229ENST00000641891 LINC01545Q5VT33 79 aa12.81□□□□□ -0.36
PHGDH-229ENST00000641891 LENEPQ9Y5L5 61 aa12.81□□□□□ -0.36
PHGDH-229ENST00000641891 LRRK2Q5S007 2527 aa12.81□□□□□ -0.36
PHGDH-229ENST00000641891 TCF21O43680 179 aa12.81□□□□□ -0.36
PHGDH-229ENST00000641891 Q5PR19 223 aa12.81□□□□□ -0.36
PHGDH-229ENST00000641891 USP9YO00507 2555 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-229ENST00000641891 DEFB113Q30KQ7 82 aa12.8□□□□□ -0.36
PHGDH-229ENST00000641891 WFDC3Q8IUB2 231 aa12.8□□□□□ -0.36
PHGDH-229ENST00000641891 VPREB3Q9UKI3 123 aa12.8□□□□□ -0.36
PHGDH-229ENST00000641891 UFC1Q9Y3C8 167 aa12.8□□□□□ -0.36
PHGDH-229ENST00000641891 TNFRSF6BO95407 300 aa12.8□□□□□ -0.36
PHGDH-229ENST00000641891 MAP1LC3AQ9H492 121 aa12.8□□□□□ -0.36
PHGDH-229ENST00000641891 BEX4Q9NWD9 120 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-229ENST00000641891 TRAV26-2A0A0B4J265 109 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms