RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 DAZ1Q9NQZ3 744 aaKnown RBP13.58□□□□□ -0.24
PHGDH-226ENST00000641756 NBPF19A0A087WUL8 3843 aa13.58□□□□□ -0.24
PHGDH-226ENST00000641756 IGHV1-24A0A0C4DH33 117 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 HOXA3O43365 443 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-226ENST00000641756 FOXE3Q13461 319 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 HIST2H2BCQ6DN03 193 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 VAMP8Q9BV40 100 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 IGKV3D-20A0A0C4DH25 116 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 D6R8Y8 96 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 RPLP1P05386 114 aaKnown RBP13.57□□□□□ -0.24
PHGDH-226ENST00000641756 SRD5A1P18405 259 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 FAM104BQ5XKR9 115 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 KRTAP1-3Q8IUG1 177 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 MSRB1Q9NZV6 116 aa13.57□□□□□ -0.24
PHGDH-226ENST00000641756 J3KRW8 73 aa13.56□□□□□ -0.24
PHGDH-226ENST00000641756 HIST1H1AQ02539 215 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-226ENST00000641756 NDUFAF3Q9BU61 184 aa13.55□□□□□ -0.24
PHGDH-226ENST00000641756 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
PHGDH-226ENST00000641756 PRR9Q5T870 116 aa13.55□□□□□ -0.24
PHGDH-226ENST00000641756 DUX5Q96PT3 197 aa13.55□□□□□ -0.24
PHGDH-226ENST00000641756 ZNF702PQ9H963 129 aa13.55□□□□□ -0.24
PHGDH-226ENST00000641756 SMPXQ9UHP9 88 aa13.55□□□□□ -0.24
PHGDH-226ENST00000641756 C2orf70A6NJV1 201 aa13.54□□□□□ -0.24
PHGDH-226ENST00000641756 MRPL51Q4U2R6 128 aaKnown RBP13.54□□□□□ -0.24
PHGDH-226ENST00000641756 LINC00173Q6ZV60 143 aa13.54□□□□□ -0.24
PHGDH-226ENST00000641756 ATOH7Q8N100 152 aa13.54□□□□□ -0.24
PHGDH-226ENST00000641756 F6UB75 175 aa13.54□□□□□ -0.24
PHGDH-226ENST00000641756 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
PHGDH-226ENST00000641756 CYB5R2Q6BCY4 276 aa13.54□□□□□ -0.24
PHGDH-226ENST00000641756 PRRC2AP48634 2157 aaKnown RBP13.53□□□□□ -0.24
PHGDH-226ENST00000641756 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
PHGDH-226ENST00000641756 SMKR1H3BMG3 65 aa13.53□□□□□ -0.24
PHGDH-226ENST00000641756 OR10J6PQ8NGY7 276 aa13.53□□□□□ -0.24
PHGDH-226ENST00000641756 PPP1R14DQ9NXH3 145 aa13.53□□□□□ -0.24
PHGDH-226ENST00000641756 TIMM8BQ9Y5J9 83 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-226ENST00000641756 LOC389332A0A1B0GUA5 103 aa13.52□□□□□ -0.24
PHGDH-226ENST00000641756 SPATA12Q7Z6I5 190 aa13.52□□□□□ -0.24
PHGDH-226ENST00000641756 PRELID3AQ96N28 172 aa13.52□□□□□ -0.24
PHGDH-226ENST00000641756 ZNF469Q96JG9 3925 aaPredicted RBP13.52□□□□□ -0.24
PHGDH-226ENST00000641756 APCP25054 2843 aa13.52□□□□□ -0.24
PHGDH-226ENST00000641756 OVOL1O14753 267 aa13.52□□□□□ -0.25
PHGDH-226ENST00000641756 LEPROTL1O95214 131 aa13.52□□□□□ -0.25
PHGDH-226ENST00000641756 PRSS3P2Q8NHM4 247 aa13.52□□□□□ -0.25
PHGDH-226ENST00000641756 C20orf144Q9BQM9 153 aa13.52□□□□□ -0.25
PHGDH-226ENST00000641756 U3KQK5 164 aa13.52□□□□□ -0.25
PHGDH-226ENST00000641756 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 K7EMT4 169 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 NCR2O95944 276 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 WFDC3Q8IUB2 231 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 ORMDL3Q8N138 153 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 LINC00477Q96M19 166 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 CNFNQ9BYD5 112 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 CREBBPQ92793 2442 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 MXRA5Q9NR99 2828 aa13.51□□□□□ -0.25
PHGDH-226ENST00000641756 IFI27P40305 119 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-226ENST00000641756 CKS2P33552 79 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 SPATA45Q537H7 98 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 FA2HQ7L5A8 372 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 WFDC11Q8NEX6 87 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 TMEM191AQ9H0A3 160 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 AP5S1Q9NUS5 200 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 UFC1Q9Y3C8 167 aa13.5□□□□□ -0.25
PHGDH-226ENST00000641756 MAJINQ3KP22 176 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 OR8A1Q8NGG7 326 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 OR10AG1Q8NH19 301 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 RNF185Q96GF1 192 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 TMEM70Q9BUB7 260 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 LENEPQ9Y5L5 61 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 PRSS57Q6UWY2 283 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 ZNF705AQ6ZN79 300 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-226ENST00000641756 SIGLEC8Q9NYZ4 499 aa13.49□□□□□ -0.25
PHGDH-226ENST00000641756 NPYP01303 97 aa13.48□□□□□ -0.25
PHGDH-226ENST00000641756 TENM4Q6N022 2769 aa13.48□□□□□ -0.25
PHGDH-226ENST00000641756 IGHV4OR15-8A0A075B7B6 117 aa13.48□□□□□ -0.25
PHGDH-226ENST00000641756 A0A087WW49 117 aa13.48□□□□□ -0.25
PHGDH-226ENST00000641756 ELANEP08246 267 aa13.48□□□□□ -0.25
PHGDH-226ENST00000641756 RAB4AP20338 218 aa13.48□□□□□ -0.25
PHGDH-226ENST00000641756 KIR3DS1Q14943 382 aa13.48□□□□□ -0.25
PHGDH-226ENST00000641756 GAS8-AS1O95177 125 aa13.47□□□□□ -0.25
PHGDH-226ENST00000641756 LGALS1P09382 135 aaKnown RBP13.47□□□□□ -0.25
PHGDH-226ENST00000641756 TFPI2P48307 235 aa13.47□□□□□ -0.25
PHGDH-226ENST00000641756 SYNJ2BPP57105 145 aa13.47□□□□□ -0.25
PHGDH-226ENST00000641756 MIEN1Q9BRT3 115 aa13.47□□□□□ -0.25
PHGDH-226ENST00000641756 SYS1-DBNDD2H3BUS1 97 aa13.46□□□□□ -0.25
PHGDH-226ENST00000641756 OR5AL1P0C617 328 aa13.46□□□□□ -0.25
PHGDH-226ENST00000641756 DMRTA1Q5VZB9 504 aa13.46□□□□□ -0.25
PHGDH-226ENST00000641756 DCANP1Q8TF63 244 aa13.46□□□□□ -0.25
PHGDH-226ENST00000641756 H0Y8G0 127 aa13.46□□□□□ -0.26
PHGDH-226ENST00000641756 H3BVH4 76 aa13.46□□□□□ -0.26
PHGDH-226ENST00000641756 EREGO14944 169 aa13.46□□□□□ -0.26
PHGDH-226ENST00000641756 RNASE4P34096 147 aaKnown RBP13.46□□□□□ -0.26
PHGDH-226ENST00000641756 MYOZ3Q8TDC0 251 aa13.46□□□□□ -0.26
PHGDH-226ENST00000641756 FXYD7P58549 80 aa13.45□□□□□ -0.26
PHGDH-226ENST00000641756 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
PHGDH-226ENST00000641756 MCRIP2Q9BUT9 160 aaKnown RBP13.45□□□□□ -0.26
PHGDH-226ENST00000641756 TRAV21A0A0B4J279 112 aa13.45□□□□□ -0.26
PHGDH-226ENST00000641756 EVI2AP22794 236 aa13.45□□□□□ -0.26
PHGDH-226ENST00000641756 ID1P41134 155 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms