RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 IGLL5B9A064 214 aa10.58□□□□□ -0.72
PAX6-280ENST00000640872 PRAC2D3DTV9 90 aa10.58□□□□□ -0.72
PAX6-280ENST00000640872 K7ENP7 123 aa10.58□□□□□ -0.72
PAX6-280ENST00000640872 PPIFP30405 207 aaKnown RBP10.58□□□□□ -0.72
PAX6-280ENST00000640872 ZNF672Q499Z4 452 aaPredicted RBP10.58□□□□□ -0.72
PAX6-280ENST00000640872 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
PAX6-280ENST00000640872 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
PAX6-280ENST00000640872 MRPL35Q9NZE8 188 aaKnown RBP10.58□□□□□ -0.72
PAX6-280ENST00000640872 PRSS47A8MTI9 375 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 K7EMI3 77 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 TAL2Q16559 108 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 SPANXB1Q9NS25 103 aaPredicted RBP10.57□□□□□ -0.72
PAX6-280ENST00000640872 TMEM160Q9NX00 188 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 CIDEAO60543 219 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 TRGV3P03979 118 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 HES1Q14469 280 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 FOXI2Q6ZQN5 318 aa10.57□□□□□ -0.72
PAX6-280ENST00000640872 ODF3BA8MYP8 253 aa10.56□□□□□ -0.72
PAX6-280ENST00000640872 F8W1H4 67 aa10.56□□□□□ -0.72
PAX6-280ENST00000640872 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
PAX6-280ENST00000640872 KLRD1Q13241 179 aa10.56□□□□□ -0.72
PAX6-280ENST00000640872 IL17RELQ6ZVW7 336 aa10.56□□□□□ -0.72
PAX6-280ENST00000640872 NRACQ8N912 160 aa10.56□□□□□ -0.72
PAX6-280ENST00000640872 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
PAX6-280ENST00000640872 RBAKDNA6NC62 111 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 ZNF479Q96JC4 524 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 IGHV3OR16-8A0A075B7F1 116 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 A0A087WX48 190 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.55□□□□□ -0.72
PAX6-280ENST00000640872 SCGB2A1O75556 95 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 AZU1P20160 251 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 WFDC2Q14508 124 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 LAGE3Q14657 143 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 C12orf74Q32Q52 190 aa10.55□□□□□ -0.72
PAX6-280ENST00000640872 SPTBN1Q01082 2364 aaKnown RBP10.55□□□□□ -0.72
PAX6-280ENST00000640872 CD3EP07766 207 aa10.54□□□□□ -0.72
PAX6-280ENST00000640872 RNF182Q8N6D2 247 aa10.54□□□□□ -0.72
PAX6-280ENST00000640872 MYOZ3Q8TDC0 251 aa10.54□□□□□ -0.72
PAX6-280ENST00000640872 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.54□□□□□ -0.72
PAX6-280ENST00000640872 Q8N6K4 173 aa10.54□□□□□ -0.72
PAX6-280ENST00000640872 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
PAX6-280ENST00000640872 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
PAX6-280ENST00000640872 TSSC4Q9Y5U2 329 aaPredicted RBP10.54□□□□□ -0.72
PAX6-280ENST00000640872 VPS13CQ709C8 3753 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 IGHV7-4-1A0A0J9YVY3 117 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 GOSR1O95249 250 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 CD300EQ496F6 205 aaPredicted RBP10.53□□□□□ -0.72
PAX6-280ENST00000640872 RAXQ9Y2V3 346 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 IGHV3-35A0A0C4DH35 117 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 GRNP28799 593 aaKnown RBP10.53□□□□□ -0.72
PAX6-280ENST00000640872 ZFAND3Q9H8U3 227 aa10.53□□□□□ -0.72
PAX6-280ENST00000640872 GAGE12HA6NDE8 117 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 NCBP2LA6PVI3 153 aaKnown RBP10.52□□□□□ -0.73
PAX6-280ENST00000640872 H3BMG7 143 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 BUB3O43684 328 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 PLNP26678 52 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 AGPAT4-IT1Q9H0P7 198 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 LINC01619G3V211 115 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 EFNA4P52798 201 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 SPATA25Q9BR10 227 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
PAX6-280ENST00000640872 MAP1AP78559 2803 aaPredicted RBP10.51□□□□□ -0.73
PAX6-280ENST00000640872 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 M0R1W7 72 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 PRTN3P24158 256 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 CDSNQ15517 529 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 RRN3P1Q2M238 152 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 MSRB2Q9Y3D2 182 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 ARHGAP32A7KAX9 2087 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 IGHV7-81A0A0B4J1V7 117 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 TRAV12-1A0A0B4J245 112 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 J3QR89 54 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 TMEM11P17152 192 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 RAB9AP51151 201 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 LINC01560Q8TB33 94 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 ZNF502Q8TBZ5 544 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 HIST1H4GQ99525 98 aa10.51□□□□□ -0.73
PAX6-280ENST00000640872 SPAG8Q99932 426 aaPredicted RBP10.51□□□□□ -0.73
PAX6-280ENST00000640872 AGRNO00468 2067 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 ZNF207O43670 478 aaKnown RBP10.5□□□□□ -0.73
PAX6-280ENST00000640872 EBI3Q14213 229 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 ETDBQ3ZM63 59 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 AMTNQ6UX39 209 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 SH2D6Q7Z4S9 175 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 TRAV8-2A0A0B4J237 113 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 F8VRH5 84 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 CCDC144NLQ6NUI1 221 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 CLEC2AQ6UVW9 174 aa10.5□□□□□ -0.73
PAX6-280ENST00000640872 CLPSL1A2RUU4 121 aa10.49□□□□□ -0.73
PAX6-280ENST00000640872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.49□□□□□ -0.73
PAX6-280ENST00000640872 H7C1H1 209 aa10.49□□□□□ -0.73
PAX6-280ENST00000640872 SPTAN1Q13813 2472 aaKnown RBP10.49□□□□□ -0.73
PAX6-280ENST00000640872 C15orf32Q32M92 178 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms