RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 MCRIP2Q9BUT9 160 aaKnown RBP7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 TP53TG3Q9ULZ0 132 aa7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 APCP25054 2843 aa7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 FAM181BA6NEQ2 426 aa7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 FABP5P3A8MUU1 101 aa7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 SMKR1H3BMG3 65 aa7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 PAFAH1B2P68402 229 aa7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 Q6ZWC4 215 aa7.45□□□□□ -1.22
CACNA1A-248ENST00000637774 MRPS12O15235 138 aaKnown RBP7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 NCR2O95944 276 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 EDN2P20800 178 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 FA2HQ7L5A8 372 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 AMN1Q8IY45 258 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 FER1L6-AS1Q8NA97 138 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 OR10J6PQ8NGY7 276 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 DPF1Q92782 380 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 MBD6Q96DN6 1003 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 SLC50A1Q9BRV3 221 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 PRSS22Q9GZN4 317 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 AGPAT4-IT1Q9H0P7 198 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 ZFHX3Q15911 3703 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 C19orf71A6NCJ1 209 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 ZNF324O75467 553 aaPredicted RBP7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 GPX1P07203 203 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 ZNF688P0C7X2 276 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 NIT1Q86X76 327 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 USMG5Q96IX5 58 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 KCNS1Q96KK3 526 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 ZNF48Q96MX3 618 aaPredicted RBP7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 VAMP8Q9BV40 100 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 ZNF492Q9P255 531 aa7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 PEF1Q9UBV8 284 aaKnown RBP7.44□□□□□ -1.22
CACNA1A-248ENST00000637774 COA6Q5JTJ3 125 aaKnown RBP7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 SPANXN1Q5VSR9 72 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 PMCHL2Q9BQD1 86 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 POLR3KQ9Y2Y1 108 aaPredicted RBP7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 MXRA5Q9NR99 2828 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 CLPSL1A2RUU4 121 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 CBY3A6NI87 242 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 IGHV4-31P0DP07 118 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 CKS2P33552 79 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 RNASE4P34096 147 aaKnown RBP7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 TDRG1Q3Y452 100 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 CFAP161Q6P656 301 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 Q6ZQT7 251 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 WIPF2Q8TF74 440 aaPredicted RBP7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 YAE1D1Q9NRH1 226 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
CACNA1A-248ENST00000637774 M0R381 172 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 FOXE3Q13461 319 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 DEFB104AQ8WTQ1 72 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 ALKBH7Q9BT30 221 aaPredicted RBP7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 IGF1P05019 195 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 PTTG1IPP53801 180 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 SMIM15Q7Z3B0 74 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 SMIM12Q96EX1 92 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 DAZ1Q9NQZ3 744 aaKnown RBP7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 NACAE9PAV3 2078 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 D6R8Y8 96 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 J3QKU1 62 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 Q0VG73 95 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 OR10J3Q5JRS4 329 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 VPREB3Q9UKI3 123 aa7.42□□□□□ -1.22
CACNA1A-248ENST00000637774 UNC79Q9P2D8 2635 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 H3BVH4 76 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 NDUFA4O00483 81 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 EVI2AP22794 236 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 PSMG4Q5JS54 123 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 CCL25O15444 150 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 LINC00310P59036 64 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 OR8A1Q8NGG7 326 aa7.41□□□□□ -1.22
CACNA1A-248ENST00000637774 AGRNO00468 2067 aa7.4□□□□□ -1.22
CACNA1A-248ENST00000637774 C3orf79P0CE67 100 aa7.4□□□□□ -1.22
CACNA1A-248ENST00000637774 CT83Q5H943 113 aa7.4□□□□□ -1.22
CACNA1A-248ENST00000637774 LOC102724200A0A096LPH7 203 aaPredicted RBP7.4□□□□□ -1.22
CACNA1A-248ENST00000637774 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
CACNA1A-248ENST00000637774 GCN1Q92616 2671 aaKnown RBP7.4□□□□□ -1.23
CACNA1A-248ENST00000637774 LOXL1Q08397 574 aaPredicted RBP7.4□□□□□ -1.23
CACNA1A-248ENST00000637774 KIR3DS1Q14943 382 aa7.4□□□□□ -1.23
CACNA1A-248ENST00000637774 C1orf194Q5T5A4 169 aa7.4□□□□□ -1.23
CACNA1A-248ENST00000637774 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.23
CACNA1A-248ENST00000637774 RNF114Q9Y508 228 aa7.4□□□□□ -1.23
CACNA1A-248ENST00000637774 UBR5O95071 2799 aaPredicted RBP7.4□□□□□ -1.23
CACNA1A-248ENST00000637774 A6NJY4 79 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 J3QLI3 93 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 RASL11AQ6T310 242 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 GFRA4Q9GZZ7 299 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 IGHG4P01861 327 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 MGPP08493 103 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 C20orf173Q96LM9 149 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 TRAV8-2A0A0B4J237 113 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 IGHV7-4-1A0A0J9YVY3 117 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 TMEM190Q8WZ59 177 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 C18orf15Q96N68 181 aa7.39□□□□□ -1.23
CACNA1A-248ENST00000637774 A0A1B0GXF2 115 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms