RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 A0A0J9YY99 117 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 CCL18P55774 89 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 FAM3BP58499 235 aaPredicted RBP9.67□□□□□ -0.86
PNKP-228ENST00000637325 SERF2P84101 59 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 LINC00336Q6ZUF6 198 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 TMPRSS5Q9H3S3 457 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 TP53TG3Q9ULZ0 132 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 LENEPQ9Y5L5 61 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 DNAH17Q9UFH2 4485 aa9.67□□□□□ -0.86
PNKP-228ENST00000637325 TCL1AP56279 114 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 ZNF415Q09FC8 603 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 MUC21Q5SSG8 566 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
PNKP-228ENST00000637325 Q6ZQT7 251 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 GOLT1AQ6ZVE7 132 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 TMED6Q8WW62 240 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 RAB24Q969Q5 203 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 ACTR3CQ9C0K3 210 aaPredicted RBP9.66□□□□□ -0.86
PNKP-228ENST00000637325 SH3BGRL3Q9H299 93 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 KLF12Q9Y4X4 402 aa9.66□□□□□ -0.86
PNKP-228ENST00000637325 DNAH2Q9P225 4427 aa9.65□□□□□ -0.86
PNKP-228ENST00000637325 SPINK4O60575 86 aa9.65□□□□□ -0.86
PNKP-228ENST00000637325 STAG3L2P0CL84 134 aa9.65□□□□□ -0.86
PNKP-228ENST00000637325 STAG3L3P0CL85 134 aa9.65□□□□□ -0.86
PNKP-228ENST00000637325 HOXA5P20719 270 aa9.65□□□□□ -0.86
PNKP-228ENST00000637325 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
PNKP-228ENST00000637325 ARL6IP6Q8N6S5 226 aa9.65□□□□□ -0.86
PNKP-228ENST00000637325 TNFSF18Q9UNG2 199 aa9.65□□□□□ -0.86
PNKP-228ENST00000637325 RNF222A6NCQ9 220 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 CXorf1O96002 111 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 GCHFRP30047 84 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 GNG5P63218 68 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 FAM159AQ6UWV7 190 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 IQCF2Q8IXL9 164 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 ST6GAL2Q96JF0 529 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 TMEM167BQ9NRX6 74 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 MRPL16Q9NX20 251 aaKnown RBP9.64□□□□□ -0.87
PNKP-228ENST00000637325 NAGKQ9UJ70 344 aa9.64□□□□□ -0.87
PNKP-228ENST00000637325 K7EQM0 130 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 TMEM183BQ1AE95 376 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 Q6AWC8 147 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 Q6ZR54 194 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 TMEM183AQ8IXX5 376 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 C18orf15Q96N68 181 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 NDFIP1Q9BT67 221 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 LINC00588Q9Y4M8 146 aa9.63□□□□□ -0.87
PNKP-228ENST00000637325 TRGV11A0A075B6L2 103 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 TRAV8-1A0A0A6YYK1 113 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 SERTM2A0A1B0GWG4 89 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 PRSS29PA6NIE9 313 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 H3BNG1 76 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 ARPC5O15511 151 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 IGHV3-53P01767 116 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 SSX7Q7RTT5 188 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 C5orf17Q8NAS9 161 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 FAT2Q9NYQ8 4349 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 HECTD4Q9Y4D8 3996 aa9.62□□□□□ -0.87
PNKP-228ENST00000637325 TRAV21A0A0B4J279 112 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 F6UZH7 168 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 TAAR5O14804 337 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 RTL8CO15255 209 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 SUMO1P63165 101 aaKnown RBP9.61□□□□□ -0.87
PNKP-228ENST00000637325 AKR1C8PQ5T2L2 129 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 SUN5Q8TC36 379 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 SGK494Q96LW2 274 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
PNKP-228ENST00000637325 CTXND1A0A1B0GTU2 59 aa9.6□□□□□ -0.87
PNKP-228ENST00000637325 PAX4O43316 350 aa9.6□□□□□ -0.87
PNKP-228ENST00000637325 TCRAP04437 139 aa9.6□□□□□ -0.87
PNKP-228ENST00000637325 SPXQ9BT56 116 aa9.6□□□□□ -0.87
PNKP-228ENST00000637325 NBDYA0A0U1RRE5 68 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 G3V3Q6 166 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 SMLR1H3BR10 107 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 SLAQ13239 276 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 TVP23CQ96ET8 276 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 VSIG2Q96IQ7 327 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 Q9H8V8 135 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 EPDR1Q9UM22 224 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 PSG8Q9UQ74 426 aa9.59□□□□□ -0.87
PNKP-228ENST00000637325 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 GNRH2O43555 120 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 ESRGQ1W209 222 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 TDRG1Q3Y452 100 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 ZFP69Q49AA0 526 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 CYB561D1Q8N8Q1 229 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 KCNS1Q96KK3 526 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 SDF2L1Q9HCN8 221 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 PRO0255Q9UI72 69 aa9.58□□□□□ -0.88
PNKP-228ENST00000637325 A0A096LPF7 62 aa9.57□□□□□ -0.88
PNKP-228ENST00000637325 A0A1W2PRE2 83 aa9.57□□□□□ -0.88
PNKP-228ENST00000637325 GGTLC3B5MD39 225 aa9.57□□□□□ -0.88
PNKP-228ENST00000637325 IFNA7P01567 189 aa9.57□□□□□ -0.88
PNKP-228ENST00000637325 FGF8P55075 233 aaPredicted RBP9.57□□□□□ -0.88
PNKP-228ENST00000637325 UBE2G2P60604 165 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms