RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 C1RLQ9NZP8 487 aa9□□□□□ -0.97
CLN6-217ENST00000636964 CYSLTR1Q9Y271 337 aa9□□□□□ -0.97
CLN6-217ENST00000636964 H3BTX0 84 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 K7EP34 96 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 OR2J3O76001 311 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 AVPP01185 164 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 MBD6Q96DN6 1003 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 PAXXQ9BUH6 204 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 MRPL32Q9BYC8 188 aaKnown RBP8.99□□□□□ -0.97
CLN6-217ENST00000636964 ST20Q9HBF5 79 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 MTORP42345 2549 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 A0A0G2JLM5 398 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 IGKV1-17P01599 117 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 C8orf86Q6ZUL3 223 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 TMEM70Q9BUB7 260 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 ACANP16112 2415 aa8.99□□□□□ -0.97
CLN6-217ENST00000636964 LY6EQ16553 131 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 LINC00527Q9UJ94 153 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 ARL2-SNX15V9GYD0 113 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 ATP6V0E1O15342 81 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 HIST2H2BCQ6DN03 193 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 NUP35Q8NFH5 326 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 WIPF2Q8TF74 440 aaPredicted RBP8.98□□□□□ -0.97
CLN6-217ENST00000636964 IGHV1-24A0A0C4DH33 117 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 G3V318 75 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 SYS1-DBNDD2H3BUS1 97 aa8.98□□□□□ -0.97
CLN6-217ENST00000636964 MGST1P10620 155 aaKnown RBP8.98□□□□□ -0.97
CLN6-217ENST00000636964 TENM4Q6N022 2769 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 IGLV11-55A0A075B6I3 123 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 TTC9CQ8N5M4 171 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 A0A1W2PRX2 142 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 B4DSR2 109 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 OR9G4Q8NGQ1 327 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 PIFOQ8TCI5 191 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 GRAMD2BQ96HH9 432 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 IGHV3-35A0A0C4DH35 117 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 TMEM189A5PLL7 270 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 H3BUT2 72 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 HLA-DRB1P01911 266 aa8.97□□□□□ -0.97
CLN6-217ENST00000636964 BCL6BQ8N143 479 aaPredicted RBP8.97□□□□□ -0.97
CLN6-217ENST00000636964 FXYD5Q96DB9 178 aa8.96□□□□□ -0.97
CLN6-217ENST00000636964 IGHV3OR16-8A0A075B7F1 116 aa8.96□□□□□ -0.98
CLN6-217ENST00000636964 RNF223E7ERA6 249 aa8.96□□□□□ -0.98
CLN6-217ENST00000636964 CCDC179H3BU77 68 aa8.96□□□□□ -0.98
CLN6-217ENST00000636964 ZNF331Q9NQX6 463 aaPredicted RBP8.96□□□□□ -0.98
CLN6-217ENST00000636964 HIGD1AQ9Y241 93 aa8.96□□□□□ -0.98
CLN6-217ENST00000636964 SPCS1Q9Y6A9 102 aa8.96□□□□□ -0.98
CLN6-217ENST00000636964 TMEM213A2RRL7 107 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 IL4P05112 153 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 FOXA3P55318 350 aaPredicted RBP8.95□□□□□ -0.98
CLN6-217ENST00000636964 C5orf56Q8N8D9 126 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 C21orf62Q9NYP8 219 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 F8W735 103 aaPredicted RBP8.95□□□□□ -0.98
CLN6-217ENST00000636964 H3BUX3 64 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 CAMPP49913 170 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 DSCR9P59020 149 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 SGK494Q96LW2 274 aa8.95□□□□□ -0.98
CLN6-217ENST00000636964 SLC25A39Q9BZJ4 359 aaPredicted RBP8.95□□□□□ -0.98
CLN6-217ENST00000636964 A0A1B0GXF2 115 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 GNG5P63218 68 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 OR10AG1Q8NH19 301 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 APCP25054 2843 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 NBPF19A0A087WUL8 3843 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 CT45A10P0DMU9 189 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 SLC25A16P16260 332 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 ZNF138P52744 262 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 ADAMTSL5Q6ZMM2 481 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 ZNF491Q8N8L2 437 aa8.94□□□□□ -0.98
CLN6-217ENST00000636964 HIST1H1EP10412 219 aaKnown RBP8.93□□□□□ -0.98
CLN6-217ENST00000636964 MRAPQ8TCY5 172 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 PGPA6NDG6 321 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 MT-ATP8P03928 68 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 FCGR2BP31994 310 aaPredicted RBP8.93□□□□□ -0.98
CLN6-217ENST00000636964 GPR183P32249 361 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 TCTAP57738 103 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 C15orf32Q32M92 178 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 A0A096LNT2 108 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 ZNF329Q86UD4 541 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 MOB4Q9Y3A3 225 aa8.93□□□□□ -0.98
CLN6-217ENST00000636964 HIGD1CA8MV81 97 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 FGF6P10767 208 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 GP9P14770 177 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 FAM162BQ5T6X4 162 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 RASL11AQ6T310 242 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 FOXI2Q6ZQN5 318 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 LINC01356Q8N9X3 169 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 SPAG8Q99932 426 aaPredicted RBP8.92□□□□□ -0.98
CLN6-217ENST00000636964 WNK1Q9H4A3 2382 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 NCR2O95944 276 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 RPL7P18124 248 aaKnown RBP8.92□□□□□ -0.98
CLN6-217ENST00000636964 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 TEX29Q8N6K0 151 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 RNF152Q8N8N0 203 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 FAM110DQ8TAY7 271 aaPredicted RBP8.92□□□□□ -0.98
CLN6-217ENST00000636964 C17orf77Q96MU5 243 aa8.92□□□□□ -0.98
CLN6-217ENST00000636964 SLC25A5P05141 298 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms