RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 A0A087WX48 190 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 IGHV4-61A0A0C4DH41 118 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 UTF1Q5T230 341 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 HTTP42858 3142 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 CDPF1Q6NVV7 123 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 A8MWP6 167 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 E7EUB6 86 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 NDUFS8O00217 210 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 VCYO14598 125 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 TCTEX1D4Q5JR98 221 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
GABRB3-219ENST00000636466 A0A1B0GV72 72 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-219ENST00000636466 IGHV4-59P01825 116 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 MALP21145 153 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 BLCAPP62952 87 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 Q0VG73 95 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 Q6ZSR3 168 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 SPXQ9BT56 116 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 IGHV2-5P01817 119 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 H3BRN7 92 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 PLNP26678 52 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 HSD52Q0P140 79 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 CFAP161Q6P656 301 aa11.22□□□□□ -0.61
GABRB3-219ENST00000636466 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.61
GABRB3-219ENST00000636466 ANXA2RQ3ZCQ2 193 aa11.21□□□□□ -0.61
GABRB3-219ENST00000636466 Q6ZPA2 131 aa11.21□□□□□ -0.61
GABRB3-219ENST00000636466 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.61
GABRB3-219ENST00000636466 VWC2Q2TAL6 325 aa11.21□□□□□ -0.61
GABRB3-219ENST00000636466 SPOCK3Q9BQ16 436 aa11.21□□□□□ -0.61
GABRB3-219ENST00000636466 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.62
GABRB3-219ENST00000636466 SAMD5Q5TGI4 173 aa11.21□□□□□ -0.62
GABRB3-219ENST00000636466 Q8NA96 180 aa11.21□□□□□ -0.62
GABRB3-219ENST00000636466 DEFB136Q30KP8 78 aa11.21□□□□□ -0.62
GABRB3-219ENST00000636466 COPS9Q8WXC6 57 aa11.21□□□□□ -0.62
GABRB3-219ENST00000636466 PRRC2AP48634 2157 aaKnown RBP11.21□□□□□ -0.62
GABRB3-219ENST00000636466 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
GABRB3-219ENST00000636466 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
GABRB3-219ENST00000636466 LINC00158P58513 81 aa11.2□□□□□ -0.62
GABRB3-219ENST00000636466 LYPD6BQ8NI32 183 aa11.2□□□□□ -0.62
GABRB3-219ENST00000636466 C11orf52Q96A22 123 aa11.2□□□□□ -0.62
GABRB3-219ENST00000636466 MRPL36Q9P0J6 103 aaKnown RBP11.2□□□□□ -0.62
GABRB3-219ENST00000636466 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
GABRB3-219ENST00000636466 IGKV1OR2-108A0A075B7D4 117 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 TRAV8-2A0A0B4J237 113 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 PAX2Q02962 417 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 DEFB112Q30KQ8 113 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 NPYP01303 97 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 IGHV4-30-2A0A087WSY4 118 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 ADORA2A-AS1P86434 159 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 C2orf66Q6UXQ4 117 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 DYNAPQ8N1N2 210 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 DSCAMO60469 2012 aa11.19□□□□□ -0.62
GABRB3-219ENST00000636466 TEX43Q6ZNM6 134 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 PROP1O75360 226 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 SEC11AP67812 179 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 INSP01308 110 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 SNHG12Q9BXW3 62 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 SMPXQ9UHP9 88 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
GABRB3-219ENST00000636466 HOXB4P17483 251 aaPredicted RBP11.17□□□□□ -0.62
GABRB3-219ENST00000636466 FOXE3Q13461 319 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 KIAA1549LQ6ZVL6 1849 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 DLEU1O43261 78 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 IGLL1P15814 213 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 CRIP3Q6Q6R5 217 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 TMEM131Q92545 1883 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 PRSS46E5RG02 174 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 FAM231DQ6ZW35 169 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 MTURNQ8N3F0 131 aa11.17□□□□□ -0.62
GABRB3-219ENST00000636466 ZNF106Q9H2Y7 1883 aaKnown RBP11.16□□□□□ -0.62
GABRB3-219ENST00000636466 IGHV7-81A0A0B4J1V7 117 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 SMIM27A0A1W2PRY6 76 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 K7EIM0 57 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 KIR3DS1Q14943 382 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 SIGLEC8Q9NYZ4 499 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 GAGE12JA6NER3 117 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 TSPAN13O95857 204 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 GATA1P15976 413 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-219ENST00000636466 GAGE1Q13065 139 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 GAGE4Q13068 117 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 GAGE5Q13069 117 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 GAGE13Q4V321 117 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 DTX2Q86UW9 622 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 OR5A1Q8NGJ0 315 aa11.16□□□□□ -0.62
GABRB3-219ENST00000636466 ACANP16112 2415 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms