RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 DNAH2Q9P225 4427 aa12.79□□□□□ -0.36
CLN6-210ENST00000635747 TRGV2A0A075B6R0 118 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 RNF222A6NCQ9 220 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 PGPA6NDG6 321 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 MBP02144 154 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 C1QBP02746 253 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 TCL1AP56279 114 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 SERF2P84101 59 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 ZNF345Q14585 488 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 Q6ZTI0 123 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 HYLS1Q96M11 299 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 ARPC5LQ9BPX5 153 aa12.78□□□□□ -0.36
CLN6-210ENST00000635747 PSMG3Q9BT73 122 aaPredicted RBP12.78□□□□□ -0.36
CLN6-210ENST00000635747 TRAV26-1A0A087WT03 109 aa12.77□□□□□ -0.37
CLN6-210ENST00000635747 SMLR1H3BR10 107 aa12.77□□□□□ -0.37
CLN6-210ENST00000635747 RAB2AP61019 212 aa12.77□□□□□ -0.37
CLN6-210ENST00000635747 PRR9Q5T870 116 aa12.77□□□□□ -0.37
CLN6-210ENST00000635747 Q8TAT8 98 aa12.77□□□□□ -0.37
CLN6-210ENST00000635747 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
CLN6-210ENST00000635747 CDC34P49427 236 aaPredicted RBP12.76□□□□□ -0.37
CLN6-210ENST00000635747 HSD17B11Q8NBQ5 300 aa12.76□□□□□ -0.37
CLN6-210ENST00000635747 TAAR5O14804 337 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 RTL8CO15255 209 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 ARPC5O15511 151 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 SPINK4O60575 86 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 HOXA5P20719 270 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 Q6AWC8 147 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 OR11H4Q8NGC9 324 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 TMPRSS5Q9H3S3 457 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 KLF12Q9Y4X4 402 aa12.75□□□□□ -0.37
CLN6-210ENST00000635747 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 DNAH17Q9UFH2 4485 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 A0A0D9SG52 128 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 PRSS29PA6NIE9 313 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 STAG3L2P0CL84 134 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 STAG3L3P0CL85 134 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 ATP6V0CP27449 155 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 ZNF415Q09FC8 603 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 C1orf134Q5TEV5 83 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 KCNRGQ8N5I3 272 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 ZNRF2Q8NHG8 242 aa12.74□□□□□ -0.37
CLN6-210ENST00000635747 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 A0A0J9YY99 117 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 SERTM2A0A1B0GWG4 89 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 HMGB3O15347 200 aaKnown RBP12.73□□□□□ -0.37
CLN6-210ENST00000635747 EIF3GO75821 320 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLN6-210ENST00000635747 ARL14EPLP0DKL9 152 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 FAM159AQ6UWV7 190 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 SSX7Q7RTT5 188 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 RAB24Q969Q5 203 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 TP53TG3Q9ULZ0 132 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
CLN6-210ENST00000635747 SLAQ13239 276 aa12.72□□□□□ -0.37
CLN6-210ENST00000635747 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
CLN6-210ENST00000635747 ACTR3CQ9C0K3 210 aaPredicted RBP12.72□□□□□ -0.37
CLN6-210ENST00000635747 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
CLN6-210ENST00000635747 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 NBDYA0A0U1RRE5 68 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 K7EQM0 130 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 Q6ZQT7 251 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 SUN5Q8TC36 379 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 SPXQ9BT56 116 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 TMEM167BQ9NRX6 74 aa12.71□□□□□ -0.37
CLN6-210ENST00000635747 NACAE9PAV3 2078 aa12.71□□□□□ -0.38
CLN6-210ENST00000635747 CXorf1O96002 111 aa12.7□□□□□ -0.38
CLN6-210ENST00000635747 GCHFRP30047 84 aa12.7□□□□□ -0.38
CLN6-210ENST00000635747 TDRG1Q3Y452 100 aa12.7□□□□□ -0.38
CLN6-210ENST00000635747 MUC21Q5SSG8 566 aa12.7□□□□□ -0.38
CLN6-210ENST00000635747 C5orf17Q8NAS9 161 aa12.7□□□□□ -0.38
CLN6-210ENST00000635747 TRAV21A0A0B4J279 112 aa12.69□□□□□ -0.38
CLN6-210ENST00000635747 A0A1B0GVY2 172 aa12.69□□□□□ -0.38
CLN6-210ENST00000635747 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
CLN6-210ENST00000635747 Q9H8V8 135 aa12.69□□□□□ -0.38
CLN6-210ENST00000635747 TREM1Q9NP99 234 aa12.69□□□□□ -0.38
CLN6-210ENST00000635747 MRPL16Q9NX20 251 aaKnown RBP12.69□□□□□ -0.38
CLN6-210ENST00000635747 PAX4O43316 350 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 BCL2L11O43521 198 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 PFDN1O60925 122 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 TMEM183BQ1AE95 376 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 RPL7L1Q6DKI1 246 aaKnown RBP12.68□□□□□ -0.38
CLN6-210ENST00000635747 TMEM183AQ8IXX5 376 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 VSIG2Q96IQ7 327 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 UPK3BQ9BT76 320 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 SH3BGRL3Q9H299 93 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 PRO0255Q9UI72 69 aa12.68□□□□□ -0.38
CLN6-210ENST00000635747 KANTRA0A1W2PQU2 76 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 GNG5P63218 68 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 ESRGQ1W209 222 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 TTC32Q5I0X7 151 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 TMUB2Q71RG4 321 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 KCNS1Q96KK3 526 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 NAGKQ9UJ70 344 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 PKHD1P08F94 4074 aa12.67□□□□□ -0.38
CLN6-210ENST00000635747 A0A096LPF7 62 aa12.66□□□□□ -0.38
CLN6-210ENST00000635747 TRAV8-1A0A0A6YYK1 113 aa12.66□□□□□ -0.38
CLN6-210ENST00000635747 FBLL1A6NHQ2 334 aaKnown RBP12.66□□□□□ -0.38
CLN6-210ENST00000635747 TCRAP04437 139 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms