RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 SFRP2Q96HF1 295 aa5.32□□□□□ -1.56
SMARCA2-243ENST00000635590 LINC00479Q96M42 142 aa5.32□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNF407Q9C0G0 2248 aa5.32□□□□□ -1.56
SMARCA2-243ENST00000635590 TRAV9-1A0A075B6T8 112 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 IGHV3-43A0A0B4J1X8 118 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 TRAV38-1A0A0B4J264 116 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 H7C423 109 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 MT-CO2P00403 227 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 OR4A8P0C604 315 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 NPPCP23582 126 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 OR10J1P30954 320 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 PSG7Q13046 419 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 TMEM183BQ1AE95 376 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 KRTAP21-3Q3LHN1 58 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 TCTEX1D4Q5JR98 221 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 SCGB1D4Q6XE38 83 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 GNB1LQ9BYB4 327 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 PXMP4Q9Y6I8 212 aa5.31□□□□□ -1.56
SMARCA2-243ENST00000635590 MED13Q9UHV7 2174 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 POLQO75417 2590 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 IGHV2-26A0A0B4J1V2 119 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 K7EM74 188 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 ARL14EPLP0DKL9 152 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 DEFA4P12838 97 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 CRISP2P16562 243 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 MPV17P39210 176 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 TPPP2P59282 170 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 SGMS2Q8NHU3 365 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 CMTM2Q8TAZ6 248 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 KLF14Q8TD94 323 aaPredicted RBP5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 JPT1Q9UK76 154 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 CELSR2Q9HCU4 2923 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNF705FA8MVS1 300 aaPredicted RBP5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 SRRM5B3KS81 715 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 M0R143 59 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 RBFOX2O43251 390 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 LYZL6O75951 148 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNF705DP0CH99 300 aaPredicted RBP5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNF705BP0CI00 300 aaPredicted RBP5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 C1orf194Q5T5A4 169 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNF826PQ6ZT77 177 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 FAM19A3Q7Z5A8 133 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 CEND1Q8N111 149 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 Q8N7P7 452 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 CHAC1Q9BUX1 264 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 GGTLC1Q9BX51 225 aa5.3□□□□□ -1.56
SMARCA2-243ENST00000635590 WI2-2373I1.2A0A1W2PRP0 233 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 DEFB108AA8MXU0 73 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 GCHFRP30047 84 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 YPEL3P61236 119 aaPredicted RBP5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 DAD1P61803 113 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 RHOBP62745 196 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNF90Q03938 601 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 LTC4SQ16873 150 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNRF2Q8NHG8 242 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 MGST2Q99735 147 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 DERL1Q9BUN8 251 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 ZNF430Q9H8G1 570 aaPredicted RBP5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 ENY2Q9NPA8 101 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 IL36BQ9NZH7 164 aa5.29□□□□□ -1.56
SMARCA2-243ENST00000635590 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 C9JCJ5 164 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 M0QZK8 103 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 GIG44P09565 113 aaPredicted RBP5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 OR5G3P0C626 314 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 MIC13Q5XKP0 118 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 Q6ZR03 302 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 TMEM256Q8N2U0 113 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 ANAPC13Q9BS18 74 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 NPVFQ9HCQ7 196 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 CBLN4Q9NTU7 201 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 IDI2-AS1Q9NZ38 188 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 LY96Q9Y6Y9 160 aa5.28□□□□□ -1.56
SMARCA2-243ENST00000635590 TRGV10A0A0A0MS01 117 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 YPEL1O60688 119 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 IGKV3-15P01624 115 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 TFF1P04155 84 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 NBEAP1P0C6P0 100 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 NPY1RP25929 384 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 CXCL5P42830 114 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 MORN2Q502X0 79 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 XP32Q5T750 250 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 TOMM20LQ6UXN7 152 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 TCF23Q7RTU1 214 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 C1orf174Q8IYL3 243 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 CD177Q8N6Q3 437 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 CNEP1R1Q8N9A8 125 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 YPEL2Q96QA6 119 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 TMEM106BQ9NUM4 274 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 PKIGQ9Y2B9 76 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 ARL2-SNX15V9GYD0 113 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 CRYBG3Q68DQ2 2970 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 DNAJC13O75165 2243 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 DIDO1Q9BTC0 2240 aaKnown RBP5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 SETD2Q9BYW2 2564 aaPredicted RBP5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 ITPR3Q14573 2671 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 TRBV20OR9-2A0A075B6H5 130 aa5.27□□□□□ -1.57
SMARCA2-243ENST00000635590 IGKV2D-30A0A075B6S6 120 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms