RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 CBY3A6NI87 242 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 K7EQM0 130 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 RGS13O14921 159 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 ZNF324O75467 553 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-209ENST00000635450 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 SUMO1P63165 101 aaKnown RBP11.03□□□□□ -0.64
LINC00339-209ENST00000635450 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 EIF4E3Q8N5X7 224 aaKnown RBP11.03□□□□□ -0.64
LINC00339-209ENST00000635450 ZNF680Q8NEM1 530 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
LINC00339-209ENST00000635450 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
LINC00339-209ENST00000635450 HERC2O95714 4834 aa11.02□□□□□ -0.64
LINC00339-209ENST00000635450 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 GNG5P63218 68 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 PRR9Q5T870 116 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 TMUB2Q71RG4 321 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 TCTE3Q8IZS6 198 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 STOML3Q8TAV4 291 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 PKHD1P08F94 4074 aa11.02□□□□□ -0.65
LINC00339-209ENST00000635450 IGHV1OR15-1A0A075B7D0 117 aa11.01□□□□□ -0.65
LINC00339-209ENST00000635450 A0A1W2PRE2 83 aa11.01□□□□□ -0.65
LINC00339-209ENST00000635450 MAP1LC3B2A6NCE7 125 aa11.01□□□□□ -0.65
LINC00339-209ENST00000635450 UMAD1C9J7I0 102 aa11.01□□□□□ -0.65
LINC00339-209ENST00000635450 FGF8P55075 233 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-209ENST00000635450 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
LINC00339-209ENST00000635450 NDFIP1Q9BT67 221 aa11.01□□□□□ -0.65
LINC00339-209ENST00000635450 MAP1LC3BQ9GZQ8 125 aa11.01□□□□□ -0.65
LINC00339-209ENST00000635450 TRAV8-1A0A0A6YYK1 113 aa11□□□□□ -0.65
LINC00339-209ENST00000635450 TCRAP04437 139 aa11□□□□□ -0.65
LINC00339-209ENST00000635450 ATP5G1P05496 136 aa11□□□□□ -0.65
LINC00339-209ENST00000635450 TPT1P13693 172 aaKnown RBP11□□□□□ -0.65
LINC00339-209ENST00000635450 ATP5G3P48201 142 aa11□□□□□ -0.65
LINC00339-209ENST00000635450 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
LINC00339-209ENST00000635450 NKX6-2Q9C056 277 aaPredicted RBP11□□□□□ -0.65
LINC00339-209ENST00000635450 TMPRSS5Q9H3S3 457 aa11□□□□□ -0.65
LINC00339-209ENST00000635450 hCG_2014768A0A024R1R8 64 aa10.99□□□□□ -0.65
LINC00339-209ENST00000635450 GGTLC3B5MD39 225 aa10.99□□□□□ -0.65
LINC00339-209ENST00000635450 UBE2G2P60604 165 aa10.99□□□□□ -0.65
LINC00339-209ENST00000635450 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
LINC00339-209ENST00000635450 TREM1Q9NP99 234 aa10.99□□□□□ -0.65
LINC00339-209ENST00000635450 EPDR1Q9UM22 224 aa10.99□□□□□ -0.65
LINC00339-209ENST00000635450 FBLL1A6NHQ2 334 aaKnown RBP10.98□□□□□ -0.65
LINC00339-209ENST00000635450 F5H768 121 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 IFNA7P01567 189 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 C1QBP02746 253 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
LINC00339-209ENST00000635450 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 Q6AWC8 147 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 FAM159AQ6UWV7 190 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 CYB561D1Q8N8Q1 229 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 FAM213BQ8TBF2 198 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 SGK494Q96LW2 274 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 ATG101Q9BSB4 218 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 GSN-AS1Q9NRJ2 163 aa10.98□□□□□ -0.65
LINC00339-209ENST00000635450 KIAA1109Q2LD37 5005 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 PKD1P98161 4303 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 GAGE12BA1L429 117 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 GAGE7O76087 117 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 FHITP49789 147 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 FLI1Q01543 452 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-209ENST00000635450 LGALSLQ3ZCW2 172 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-209ENST00000635450 IBA57Q5T440 356 aaKnown RBP10.97□□□□□ -0.65
LINC00339-209ENST00000635450 DPPA3Q6W0C5 159 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 Q6ZQT7 251 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 POM121L12Q8N7R1 296 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 PSG8Q9UQ74 426 aa10.97□□□□□ -0.65
LINC00339-209ENST00000635450 TRAV21A0A0B4J279 112 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 FAM74A7A6NL05 159 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 F6UZH7 168 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 M0R2N4 97 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 PPT1P50897 306 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 TCL1AP56279 114 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 ZNF415Q09FC8 603 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 ZFP69Q49AA0 526 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 EIF5AL1Q6IS14 154 aaKnown RBP10.96□□□□□ -0.65
LINC00339-209ENST00000635450 TMEM88Q6PEY1 159 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 PRNTQ86SH4 94 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 TMEM75Q8N9X5 138 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 C11orf72Q8NBR9 251 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 SFT2D1Q8WV19 159 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 NAGKQ9UJ70 344 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 TP53TG3Q9ULZ0 132 aa10.96□□□□□ -0.65
LINC00339-209ENST00000635450 DYNC1H1Q14204 4646 aaKnown RBP10.96□□□□□ -0.66
LINC00339-209ENST00000635450 TRGV11A0A075B6L2 103 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 P0DMU3 169 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 FAM231AP0DMU4 169 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 FAM231CP0DMU5 169 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 LINC00612Q8N6U2 182 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 C15orf53Q8NAA6 179 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 HIST1H2BAQ96A08 127 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 TVP23CQ96ET8 276 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 KLF12Q9Y4X4 402 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 DNAH11Q96DT5 4516 aa10.95□□□□□ -0.66
LINC00339-209ENST00000635450 IGLV2-18A0A075B6J9 118 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms