RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 DAZ2Q13117 558 aaKnown RBP9.98□□□□□ -0.81
PNKP-223ENST00000629179 Q6ZTI0 123 aa9.98□□□□□ -0.81
PNKP-223ENST00000629179 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
PNKP-223ENST00000629179 CYTL1Q9NRR1 136 aa9.98□□□□□ -0.81
PNKP-223ENST00000629179 TAAR5O14804 337 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 CXorf1O96002 111 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 ZNF726P1Q15940 193 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 UBE2DNLQ8IWF7 75 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 C15orf53Q8NAA6 179 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 ZNF680Q8NEM1 530 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 KLF12Q9Y4X4 402 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 LENEPQ9Y5L5 61 aa9.97□□□□□ -0.81
PNKP-223ENST00000629179 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 NUDT3O95989 172 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 OR5I1Q13606 314 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 MUC21Q5SSG8 566 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 ARL6IP6Q8N6S5 226 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 OR11H4Q8NGC9 324 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 TMED6Q8WW62 240 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 TVP23CQ96ET8 276 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 ST6GAL2Q96JF0 529 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 SGK494Q96LW2 274 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 DNAH6Q9C0G6 4158 aa9.96□□□□□ -0.82
PNKP-223ENST00000629179 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 A0A1B0GVG6 124 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 HOXA5P20719 270 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 TCL1AP56279 114 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 SUMO1P63165 101 aaKnown RBP9.95□□□□□ -0.82
PNKP-223ENST00000629179 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 Q6AWC8 147 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 IQCF2Q8IXL9 164 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 ARPC5LQ9BPX5 153 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 TMPRSS5Q9H3S3 457 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 TMEM167BQ9NRX6 74 aa9.95□□□□□ -0.82
PNKP-223ENST00000629179 CTXND1A0A1B0GTU2 59 aa9.94□□□□□ -0.82
PNKP-223ENST00000629179 M0R2N4 97 aa9.94□□□□□ -0.82
PNKP-223ENST00000629179 FGF8P55075 233 aaPredicted RBP9.94□□□□□ -0.82
PNKP-223ENST00000629179 RNF212Q495C1 297 aa9.94□□□□□ -0.82
PNKP-223ENST00000629179 IBA57Q5T440 356 aaKnown RBP9.94□□□□□ -0.82
PNKP-223ENST00000629179 KCNRGQ8N5I3 272 aa9.94□□□□□ -0.82
PNKP-223ENST00000629179 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
PNKP-223ENST00000629179 TREM1Q9NP99 234 aa9.94□□□□□ -0.82
PNKP-223ENST00000629179 TRGV2A0A075B6R0 118 aa9.93□□□□□ -0.82
PNKP-223ENST00000629179 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
PNKP-223ENST00000629179 A0A0J9YY99 117 aa9.93□□□□□ -0.82
PNKP-223ENST00000629179 GGTLC3B5MD39 225 aa9.93□□□□□ -0.82
PNKP-223ENST00000629179 F6UZH7 168 aa9.93□□□□□ -0.82
PNKP-223ENST00000629179 SPINK4O60575 86 aa9.93□□□□□ -0.82
PNKP-223ENST00000629179 TCRAP04437 139 aa9.93□□□□□ -0.82
PNKP-223ENST00000629179 MRPL16Q9NX20 251 aaKnown RBP9.93□□□□□ -0.82
PNKP-223ENST00000629179 IGLV2-18A0A075B6J9 118 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 HMSDA8MTL9 139 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 UBE2G2P60604 165 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 ZNF345Q14585 488 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 TMEM183BQ1AE95 376 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 FAM159AQ6UWV7 190 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 TMEM183AQ8IXX5 376 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 MDFICQ9P1T7 246 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 NAGKQ9UJ70 344 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 EPDR1Q9UM22 224 aa9.92□□□□□ -0.82
PNKP-223ENST00000629179 EPPK1P58107 5090 aaKnown RBP9.91□□□□□ -0.82
PNKP-223ENST00000629179 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
PNKP-223ENST00000629179 A0A1W2PRE2 83 aa9.91□□□□□ -0.82
PNKP-223ENST00000629179 ZNF415Q09FC8 603 aa9.91□□□□□ -0.82
PNKP-223ENST00000629179 C8orf49Q96NF6 230 aa9.91□□□□□ -0.82
PNKP-223ENST00000629179 ATG101Q9BSB4 218 aa9.91□□□□□ -0.82
PNKP-223ENST00000629179 PSG8Q9UQ74 426 aa9.91□□□□□ -0.82
PNKP-223ENST00000629179 TRAV21A0A0B4J279 112 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 A0A0D9SG52 128 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 MAP1LC3B2A6NCE7 125 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 K7EQM0 130 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 GNRH2O43555 120 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 IGLV2-11P01706 119 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 IGHV3-53P01767 116 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 C18orf15Q96N68 181 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 NDFIP1Q9BT67 221 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 MAP1LC3BQ9GZQ8 125 aa9.9□□□□□ -0.82
PNKP-223ENST00000629179 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 TRGV11A0A075B6L2 103 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 IFNA7P01567 189 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 FHITP49789 147 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
PNKP-223ENST00000629179 FLI1Q01543 452 aaPredicted RBP9.89□□□□□ -0.83
PNKP-223ENST00000629179 TDRG1Q3Y452 100 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 PRNTQ86SH4 94 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 CYB561D1Q8N8Q1 229 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 VSIG2Q96IQ7 327 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 LINC00479Q96M42 142 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 ZNF471Q9BX82 626 aaPredicted RBP9.89□□□□□ -0.83
PNKP-223ENST00000629179 DNAH10Q8IVF4 4471 aa9.89□□□□□ -0.83
PNKP-223ENST00000629179 hCG_2014768A0A024R1R8 64 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 KANTRA0A1W2PQU2 76 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 FAM74A7A6NL05 159 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 BCL2L11O43521 198 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 CCL18P55774 89 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 Q6ZR54 194 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 TMEM75Q8N9X5 138 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 SPXQ9BT56 116 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms