RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 CXorf65A6NEN9 183 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 IGLV2-11P01706 119 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 ATP5G3P48201 142 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 PMS2P11Q13670 270 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 ALKAL2Q6UX46 152 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 TMEM263Q8WUH6 116 aaKnown RBP14.54□□□□□ -0.08
PTCD3-220ENST00000627371 TVP23CQ96ET8 276 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 C16orf74Q96GX8 76 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 PSG8Q9UQ74 426 aa14.54□□□□□ -0.08
PTCD3-220ENST00000627371 DYNC2H1Q8NCM8 4307 aaKnown RBP14.53□□□□□ -0.08
PTCD3-220ENST00000627371 TEX48A0A1B0GUV7 120 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 PLAC8L1A1L4L8 177 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 SPART-AS1P0CW21 52 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 FLI1Q01543 452 aaPredicted RBP14.53□□□□□ -0.08
PTCD3-220ENST00000627371 Q6AWC8 147 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 ZNF493Q6ZR52 646 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 RNASE8Q8TDE3 154 aaKnown RBP14.53□□□□□ -0.08
PTCD3-220ENST00000627371 LINC00467Q9BRT7 94 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 NDFIP1Q9BT67 221 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 TREM1Q9NP99 234 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 MANBALQ9NQG1 85 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 DKK2Q9UBU2 259 aa14.53□□□□□ -0.08
PTCD3-220ENST00000627371 F6UZH7 168 aa14.52□□□□□ -0.09
PTCD3-220ENST00000627371 CCL20P78556 96 aa14.52□□□□□ -0.09
PTCD3-220ENST00000627371 FAM222AQ5U5X8 452 aa14.52□□□□□ -0.09
PTCD3-220ENST00000627371 C12orf74Q32Q52 190 aa14.51□□□□□ -0.09
PTCD3-220ENST00000627371 Q6ZQT7 251 aa14.51□□□□□ -0.09
PTCD3-220ENST00000627371 PRNTQ86SH4 94 aa14.51□□□□□ -0.09
PTCD3-220ENST00000627371 LINC00479Q96M42 142 aa14.51□□□□□ -0.09
PTCD3-220ENST00000627371 TRAV34A0A0B4J273 112 aa14.5□□□□□ -0.09
PTCD3-220ENST00000627371 NUPR2A6NF83 97 aa14.5□□□□□ -0.09
PTCD3-220ENST00000627371 EIF4E3Q8N5X7 224 aaKnown RBP14.5□□□□□ -0.09
PTCD3-220ENST00000627371 PHLDA1Q8WV24 401 aaPredicted RBP14.5□□□□□ -0.09
PTCD3-220ENST00000627371 GNG13Q9P2W3 67 aa14.5□□□□□ -0.09
PTCD3-220ENST00000627371 LYRM9A8MSI8 78 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 C11orf94C9JXX5 98 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 RGS13O14921 159 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 ANXA2RQ3ZCQ2 193 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 SAPCD1Q5SSQ6 148 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 Q6ZTC4 211 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 Q86TA4 180 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 C8orf49Q96NF6 230 aa14.49□□□□□ -0.09
PTCD3-220ENST00000627371 PLECQ15149 4684 aaKnown RBP14.48□□□□□ -0.09
PTCD3-220ENST00000627371 IGHV1OR15-1A0A075B7D0 117 aa14.48□□□□□ -0.09
PTCD3-220ENST00000627371 CBY3A6NI87 242 aa14.48□□□□□ -0.09
PTCD3-220ENST00000627371 CEMP1Q6PRD7 247 aaPredicted RBP14.48□□□□□ -0.09
PTCD3-220ENST00000627371 ZNF767PQ75MW2 155 aa14.48□□□□□ -0.09
PTCD3-220ENST00000627371 ZNF680Q8NEM1 530 aa14.48□□□□□ -0.09
PTCD3-220ENST00000627371 FMC1Q96HJ9 113 aa14.48□□□□□ -0.09
PTCD3-220ENST00000627371 KLF12Q9Y4X4 402 aa14.48□□□□□ -0.09
PTCD3-220ENST00000627371 TIMM8BQ9Y5J9 83 aaPredicted RBP14.48□□□□□ -0.09
PTCD3-220ENST00000627371 TENM2Q9NT68 2774 aa14.47□□□□□ -0.09
PTCD3-220ENST00000627371 TRAV21A0A0B4J279 112 aa14.47□□□□□ -0.09
PTCD3-220ENST00000627371 AKR1C3P42330 323 aa14.47□□□□□ -0.09
PTCD3-220ENST00000627371 BLOC1S1P78537 153 aa14.47□□□□□ -0.09
PTCD3-220ENST00000627371 TXNDC17Q9BRA2 123 aa14.47□□□□□ -0.09
PTCD3-220ENST00000627371 TRBV6-1A0A0K0K1D8 114 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 SCO2A0A1W2PP80 73 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 IFNA1P01562 189 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 UBE2G1P62253 170 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 TMEM183BQ1AE95 376 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 SMUG1Q53HV7 270 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 C11orf72Q8NBR9 251 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 C2CD4CQ8TF44 421 aa14.46□□□□□ -0.09
PTCD3-220ENST00000627371 SNURFLB1AK76 121 aa14.45□□□□□ -0.1
PTCD3-220ENST00000627371 GCGP01275 180 aa14.45□□□□□ -0.1
PTCD3-220ENST00000627371 ZNF80P51504 273 aaPredicted RBP14.45□□□□□ -0.1
PTCD3-220ENST00000627371 MUC21Q5SSG8 566 aa14.45□□□□□ -0.1
PTCD3-220ENST00000627371 IBA57Q5T440 356 aaKnown RBP14.45□□□□□ -0.1
PTCD3-220ENST00000627371 FAM159AQ6UWV7 190 aa14.45□□□□□ -0.1
PTCD3-220ENST00000627371 NOP10Q9NPE3 64 aaKnown RBP14.45□□□□□ -0.1
PTCD3-220ENST00000627371 TP53TG3Q9ULZ0 132 aa14.45□□□□□ -0.1
PTCD3-220ENST00000627371 TRAV10A0A0B4J240 114 aa14.44□□□□□ -0.1
PTCD3-220ENST00000627371 BCL2P10415 239 aa14.44□□□□□ -0.1
PTCD3-220ENST00000627371 DAD1P61803 113 aa14.44□□□□□ -0.1
PTCD3-220ENST00000627371 TDRG1Q3Y452 100 aa14.44□□□□□ -0.1
PTCD3-220ENST00000627371 LYPD6BQ8NI32 183 aa14.44□□□□□ -0.1
PTCD3-220ENST00000627371 ZFP30Q9Y2G7 519 aa14.44□□□□□ -0.1
PTCD3-220ENST00000627371 KLK5Q9Y337 293 aaPredicted RBP14.44□□□□□ -0.1
PTCD3-220ENST00000627371 S100A9P06702 114 aaKnown RBP14.43□□□□□ -0.1
PTCD3-220ENST00000627371 PFN1P07737 140 aaKnown RBP14.43□□□□□ -0.1
PTCD3-220ENST00000627371 TAGLN2P37802 199 aaKnown RBP14.43□□□□□ -0.1
PTCD3-220ENST00000627371 TCL1AP56279 114 aa14.43□□□□□ -0.1
PTCD3-220ENST00000627371 MEF2BQ02080 365 aaPredicted RBP14.43□□□□□ -0.1
PTCD3-220ENST00000627371 DAZ2Q13117 558 aaKnown RBP14.43□□□□□ -0.1
PTCD3-220ENST00000627371 C11orf52Q96A22 123 aa14.43□□□□□ -0.1
PTCD3-220ENST00000627371 GSN-AS1Q9NRJ2 163 aa14.43□□□□□ -0.1
PTCD3-220ENST00000627371 NAGKQ9UJ70 344 aa14.43□□□□□ -0.1
PTCD3-220ENST00000627371 KMT2CQ8NEZ4 4911 aaKnown RBP14.43□□□□□ -0.1
PTCD3-220ENST00000627371 LTAP01374 205 aa14.42□□□□□ -0.1
PTCD3-220ENST00000627371 COX8CQ7Z4L0 72 aa14.42□□□□□ -0.1
PTCD3-220ENST00000627371 LYSTQ99698 3801 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 TRGV11A0A075B6L2 103 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 DEFB131BA0A096LNP1 70 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 DEFB130BP0DP73 79 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 DEFB130AP0DP74 79 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 ZNF415Q09FC8 603 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 TEX261Q6UWH6 196 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 LINC00612Q8N6U2 182 aa14.41□□□□□ -0.1
PTCD3-220ENST00000627371 VAX2Q9UIW0 290 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 607.6 ms