RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 GIPP09681 153 aaPredicted RBP4.53□□□□□ -1.68
TCF4-249ENST00000625716 TMEM88Q6PEY1 159 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 PQLC2Q6ZP29 291 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 C9orf47Q6ZRZ4 202 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 POM121L12Q8N7R1 296 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 C15orf53Q8NAA6 179 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 HSD17B11Q8NBQ5 300 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 OR10G4Q8NGN3 311 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 OR10G9Q8NGN4 311 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 OR10G7Q8NGN6 311 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 HYLS1Q96M11 299 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 AQP10Q96PS8 301 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 PYGO2Q9BRQ0 406 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 AGPAT4-IT1Q9H0P7 198 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 Q9H3A6 140 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 STARD9Q9P2P6 4700 aa4.53□□□□□ -1.68
TCF4-249ENST00000625716 FXYD6-FXYD2A0A087WZ82 144 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 RBAKDNA6NC62 111 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 NMBP08949 121 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 CDC34P49427 236 aaPredicted RBP4.52□□□□□ -1.69
TCF4-249ENST00000625716 ZNF138P52744 262 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 RAB2AP61019 212 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 SERF2P84101 59 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 OR5I1Q13606 314 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 EIF4E3Q8N5X7 224 aaKnown RBP4.52□□□□□ -1.69
TCF4-249ENST00000625716 ZNF680Q8NEM1 530 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 OR2T35Q8NGX2 323 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 RNASE8Q8TDE3 154 aaKnown RBP4.52□□□□□ -1.69
TCF4-249ENST00000625716 GNPNAT1Q96EK6 184 aaPredicted RBP4.52□□□□□ -1.69
TCF4-249ENST00000625716 PHYHIPLQ96FC7 376 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 VGLL1Q99990 258 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 ARPC5LQ9BPX5 153 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 ATG101Q9BSB4 218 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 PSMG3Q9BT73 122 aaPredicted RBP4.52□□□□□ -1.69
TCF4-249ENST00000625716 OTORQ9NRC9 128 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 ZNF492Q9P255 531 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 RPH3ALQ9UNE2 315 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 RYR3Q15413 4870 aa4.52□□□□□ -1.69
TCF4-249ENST00000625716 TRGV2A0A075B6R0 118 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 TRBV7-9A0A0J9YWB2 115 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 GAGE12BA1L429 117 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 PGPA6NDG6 321 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 KLLNB2CW77 178 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 DIRC3C9JPN6 131 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 HMGB3O15347 200 aaKnown RBP4.51□□□□□ -1.69
TCF4-249ENST00000625716 GAGE7O76087 117 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 NUDT3O95989 172 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 GAGE12FP0CL80 117 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 GAGE12GP0CL81 117 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 GAGE12IP0CL82 117 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 CRISP2P16562 243 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 CD300CQ08708 224 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 BTN1A1Q13410 526 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 RNF212Q495C1 297 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 IQCF2Q8IXL9 164 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 FAM19A4Q96LR4 140 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 LINC00467Q9BRT7 94 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 ACTR3CQ9C0K3 210 aaPredicted RBP4.51□□□□□ -1.69
TCF4-249ENST00000625716 GSN-AS1Q9NRJ2 163 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
TCF4-249ENST00000625716 IGHV1OR15-1A0A075B7D0 117 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 TRGV1A0A0A0MS02 117 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 K7EQM0 130 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 TAAR5O14804 337 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 ZNF324O75467 553 aaPredicted RBP4.5□□□□□ -1.69
TCF4-249ENST00000625716 EIF3GO75821 320 aaKnown RBP eCLIP4.5□□□□□ -1.69
TCF4-249ENST00000625716 CXorf1O96002 111 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 ARL14EPLP0DKL9 152 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 ATP6V0CP27449 155 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 CCL18P55774 89 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 FAM3BP58499 235 aaPredicted RBP4.5□□□□□ -1.69
TCF4-249ENST00000625716 DAZ2Q13117 558 aaKnown RBP4.5□□□□□ -1.69
TCF4-249ENST00000625716 ANXA2RQ3ZCQ2 193 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 Q5BKY6 102 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 FAM159AQ6UWV7 190 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 OR2G3Q8NGZ4 309 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 Q8TAT8 98 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 RAB24Q969Q5 203 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 LYSTQ99698 3801 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 NDFIP1Q9BT67 221 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 TMEM167BQ9NRX6 74 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 TNFSF18Q9UNG2 199 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 LENEPQ9Y5L5 61 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 RYR2Q92736 4967 aa4.5□□□□□ -1.69
TCF4-249ENST00000625716 SERTM2A0A1B0GWG4 89 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 M0R2N4 97 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 STAG3L2P0CL84 134 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 STAG3L3P0CL85 134 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 GCHFRP30047 84 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 ZNF415Q09FC8 603 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 AKR1C8PQ5T2L2 129 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 IBA57Q5T440 356 aaKnown RBP4.49□□□□□ -1.69
TCF4-249ENST00000625716 RPL7L1Q6DKI1 246 aaKnown RBP4.49□□□□□ -1.69
TCF4-249ENST00000625716 Q6ZTI0 123 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 GOLT1AQ6ZVE7 132 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 ZFAND2AQ8N6M9 145 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 ARL6IP6Q8N6S5 226 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 TMED6Q8WW62 240 aa4.49□□□□□ -1.69
TCF4-249ENST00000625716 ST6GAL2Q96JF0 529 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms