RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 MBP02144 154 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 ARL14EPLP0DKL9 152 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 HOXA5P20719 270 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 ATP6V0CP27449 155 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 SERF2P84101 59 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 OR5I1Q13606 314 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
LINC00643-206ENST00000623985 GNPNAT1Q96EK6 184 aaPredicted RBP10.35□□□□□ -0.75
LINC00643-206ENST00000623985 HYLS1Q96M11 299 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
LINC00643-206ENST00000623985 PKD1P98161 4303 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 TRGV1A0A0A0MS02 117 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 PGPA6NDG6 321 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 H3BNG1 76 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 HMGB3O15347 200 aaKnown RBP10.34□□□□□ -0.75
LINC00643-206ENST00000623985 SPINK4O60575 86 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 STAG3L2P0CL84 134 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 STAG3L3P0CL85 134 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 CCL18P55774 89 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 ZNF415Q09FC8 603 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 Q5BKY6 102 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 Q6AWC8 147 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
LINC00643-206ENST00000623985 FXYD6-FXYD2A0A087WZ82 144 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 RTL8CO15255 209 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 Q6ZQT7 251 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 OR2T35Q8NGX2 323 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 SH3BGRL3Q9H299 93 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 TNFSF18Q9UNG2 199 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 KLF12Q9Y4X4 402 aa10.33□□□□□ -0.76
LINC00643-206ENST00000623985 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
LINC00643-206ENST00000623985 ZNRF2Q8NHG8 242 aa10.32□□□□□ -0.76
LINC00643-206ENST00000623985 SUN5Q8TC36 379 aa10.32□□□□□ -0.76
LINC00643-206ENST00000623985 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
LINC00643-206ENST00000623985 ST6GAL2Q96JF0 529 aa10.32□□□□□ -0.76
LINC00643-206ENST00000623985 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
LINC00643-206ENST00000623985 BORCS7-ASMTA0A0B4J1R7 106 aa10.31□□□□□ -0.76
LINC00643-206ENST00000623985 A0A0J9YY99 117 aa10.31□□□□□ -0.76
LINC00643-206ENST00000623985 SERTM2A0A1B0GWG4 89 aa10.31□□□□□ -0.76
LINC00643-206ENST00000623985 PRSS29PA6NIE9 313 aa10.31□□□□□ -0.76
LINC00643-206ENST00000623985 GCHFRP30047 84 aa10.31□□□□□ -0.76
LINC00643-206ENST00000623985 SOHLH1Q5JUK2 328 aa10.31□□□□□ -0.76
LINC00643-206ENST00000623985 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 CXorf1O96002 111 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 GNG5P63218 68 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 RPL7L1Q6DKI1 246 aaKnown RBP10.3□□□□□ -0.76
LINC00643-206ENST00000623985 FAM159AQ6UWV7 190 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 SSX7Q7RTT5 188 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
LINC00643-206ENST00000623985 TMEM167BQ9NRX6 74 aa10.3□□□□□ -0.76
LINC00643-206ENST00000623985 MRPL16Q9NX20 251 aaKnown RBP10.3□□□□□ -0.76
LINC00643-206ENST00000623985 TRAV8-1A0A0A6YYK1 113 aa10.29□□□□□ -0.76
LINC00643-206ENST00000623985 NBDYA0A0U1RRE5 68 aa10.29□□□□□ -0.76
LINC00643-206ENST00000623985 A0A1B0GVY2 172 aa10.29□□□□□ -0.76
LINC00643-206ENST00000623985 G3V3Q6 166 aa10.29□□□□□ -0.76
LINC00643-206ENST00000623985 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
LINC00643-206ENST00000623985 C1orf134Q5TEV5 83 aa10.29□□□□□ -0.76
LINC00643-206ENST00000623985 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 F6UZH7 168 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 K7EQM0 130 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 NDFIP1Q9BT67 221 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 TREM1Q9NP99 234 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
LINC00643-206ENST00000623985 A0A096LPF7 62 aa10.27□□□□□ -0.77
LINC00643-206ENST00000623985 GGTLC3B5MD39 225 aa10.27□□□□□ -0.77
LINC00643-206ENST00000623985 TAAR5O14804 337 aa10.27□□□□□ -0.77
LINC00643-206ENST00000623985 TCRAP04437 139 aa10.27□□□□□ -0.77
LINC00643-206ENST00000623985 TVP23CQ96ET8 276 aa10.27□□□□□ -0.77
LINC00643-206ENST00000623985 SPXQ9BT56 116 aa10.27□□□□□ -0.77
LINC00643-206ENST00000623985 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
LINC00643-206ENST00000623985 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
LINC00643-206ENST00000623985 ARPC5O15511 151 aa10.26□□□□□ -0.77
LINC00643-206ENST00000623985 SLAQ13239 276 aa10.26□□□□□ -0.77
LINC00643-206ENST00000623985 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
LINC00643-206ENST00000623985 MRPS16Q9Y3D3 137 aaKnown RBP10.26□□□□□ -0.77
LINC00643-206ENST00000623985 FBLL1A6NHQ2 334 aaKnown RBP10.25□□□□□ -0.77
LINC00643-206ENST00000623985 PAX4O43316 350 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 ZNF726P1Q15940 193 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 ESRGQ1W209 222 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 TTC32Q5I0X7 151 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 AKR1C8PQ5T2L2 129 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 IQCF2Q8IXL9 164 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 CYB561D1Q8N8Q1 229 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 TMEM75Q8N9X5 138 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 RASL10AQ92737 203 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 KCNS1Q96KK3 526 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 Q9H8V8 135 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
LINC00643-206ENST00000623985 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms