RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NDUFA7O95182 113 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 LY6DQ14210 128 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 LYZL1Q6UWQ5 148 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 CXorf67Q86X51 503 aaPredicted RBP6.24□□□□□ -1.41
VPS11-209ENST00000622309 PCSK5Q92824 1860 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 OOSP1A8MZH6 123 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 CXCL13O43927 109 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 HERVK_113P63121 156 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 PRCDQ00LT1 54 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 EDDM3AQ14507 147 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 PMS2CLQ68D20 193 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 Q8N1Y9 231 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 TMEM101Q96IK0 257 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 ODF3Q96PU9 254 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 LAMA5O15230 3695 aa6.24□□□□□ -1.41
VPS11-209ENST00000622309 KLK5Q9Y337 293 aaPredicted RBP6.23□□□□□ -1.41
VPS11-209ENST00000622309 ICE1Q9Y2F5 2266 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 DOCK10Q96BY6 2186 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 PLNP26678 52 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 NXT2Q9NPJ8 142 aaKnown RBP6.23□□□□□ -1.41
VPS11-209ENST00000622309 SPRY2O43597 315 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 CD7P09564 240 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 UBE2D1P51668 147 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 ERHP84090 104 aaKnown RBP6.23□□□□□ -1.41
VPS11-209ENST00000622309 ZNF56Q15929 161 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 DCTN5Q9BTE1 182 aa6.23□□□□□ -1.41
VPS11-209ENST00000622309 MRPL33O75394 65 aaKnown RBP6.22□□□□□ -1.41
VPS11-209ENST00000622309 IGHV3-48P01763 117 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 RNASE2P10153 161 aaKnown RBP6.22□□□□□ -1.41
VPS11-209ENST00000622309 OR4C13Q8NGP0 309 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 ZFHX4Q86UP3 3567 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 A0A1B0GX51 115 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 OVOL3O00110 214 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 LGALS1P09382 135 aaKnown RBP6.22□□□□□ -1.41
VPS11-209ENST00000622309 IGLC6P0CF74 106 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 LIFP15018 202 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 EXOC3-AS1Q8N2X6 119 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 C3orf22Q8N5N4 141 aa6.22□□□□□ -1.41
VPS11-209ENST00000622309 MRPL53Q96EL3 112 aaKnown RBP6.22□□□□□ -1.41
VPS11-209ENST00000622309 TFF1P04155 84 aa6.21□□□□□ -1.41
VPS11-209ENST00000622309 WDR86Q86TI4 376 aa6.21□□□□□ -1.41
VPS11-209ENST00000622309 NDUFA11Q86Y39 141 aa6.21□□□□□ -1.41
VPS11-209ENST00000622309 OTORQ9NRC9 128 aa6.21□□□□□ -1.41
VPS11-209ENST00000622309 CHCHD2Q9Y6H1 151 aaPredicted RBP6.21□□□□□ -1.41
VPS11-209ENST00000622309 POLEQ07864 2286 aa6.21□□□□□ -1.41
VPS11-209ENST00000622309 BOD1L1Q8NFC6 3051 aa6.21□□□□□ -1.41
VPS11-209ENST00000622309 FAM236AA0A1B0GUQ0 79 aa6.21□□□□□ -1.42
VPS11-209ENST00000622309 FAM236BA0A1B0GV22 79 aa6.21□□□□□ -1.42
VPS11-209ENST00000622309 ZNF815PA8K554 130 aa6.21□□□□□ -1.42
VPS11-209ENST00000622309 WNT9BO14905 357 aa6.21□□□□□ -1.42
VPS11-209ENST00000622309 CECR9P0C854 216 aa6.21□□□□□ -1.42
VPS11-209ENST00000622309 CNOT1A5YKK6 2376 aaKnown RBP6.21□□□□□ -1.42
VPS11-209ENST00000622309 IGHV3OR15-7A0A075B7D8 119 aa6.21□□□□□ -1.42
VPS11-209ENST00000622309 DTX2Q86UW9 622 aa6.21□□□□□ -1.42
VPS11-209ENST00000622309 IGLV3-12A0A075B6K2 115 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 UPK2O00526 184 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 TIMM23O14925 209 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 SUB1P53999 127 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS11-209ENST00000622309 C1orf195Q5TG92 126 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 RPS19BP1Q86WX3 136 aaKnown RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 MRPL20Q9BYC9 149 aaKnown RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 FASNP49327 2511 aaKnown RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 TEX49A0A1B0GTD5 131 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 H3BS24 57 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 UQCRQO14949 82 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 GRNP28799 593 aaKnown RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 PMVKQ15126 192 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 TMEM219Q86XT9 240 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 Q96MF0 132 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 SLC25A39Q9BZJ4 359 aaPredicted RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 SPANXCQ9NY87 97 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 PRR14LQ5THK1 2151 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 H3BMM0 161 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 M0R2P5 195 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 SS18L1O75177 396 aaPredicted RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 FSTL3O95633 263 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 Q71RC1 249 aaPredicted RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 TRPT1Q86TN4 253 aaKnown RBP6.2□□□□□ -1.42
VPS11-209ENST00000622309 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 VKORC1Q9BQB6 163 aa6.2□□□□□ -1.42
VPS11-209ENST00000622309 C15orf65H3BRN8 121 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 H7C1H1 209 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 GAGE2AQ6NT46 116 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 ZNF826PQ6ZT77 177 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 C11orf53Q8IXP5 236 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 PRO1854Q9UHT4 67 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 ANKRD11Q6UB99 2663 aaPredicted RBP6.19□□□□□ -1.42
VPS11-209ENST00000622309 TRGV11A0A075B6L2 103 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 HLA-DMBP28068 263 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 CRIP2P52943 208 aaPredicted RBP6.19□□□□□ -1.42
VPS11-209ENST00000622309 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
VPS11-209ENST00000622309 MDP1Q86V88 176 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 DEFB124Q8NES8 71 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 NBEAQ8NFP9 2946 aa6.19□□□□□ -1.42
VPS11-209ENST00000622309 RBAKDNA6NC62 111 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 F8VRH5 84 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 OXTP01178 125 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 IGLV2-11P01706 119 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 RFPL3SP0C7P2 107 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 H7C2G1 150 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms