RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TIMD4Q96H15 378 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 MRPL20Q9BYC9 149 aaKnown RBP5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 TRAV40A0A0B4J280 105 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 M0R1B8 84 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 CRYGBP07316 175 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 CD7P09564 240 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 RNASE2P10153 161 aaKnown RBP5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 CKS2P33552 79 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 MLANAQ16655 118 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 WFDC3Q8IUB2 231 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 AMN1Q8IY45 258 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 Q8N1Y9 231 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 C10orf126Q8N4M7 172 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 THAP8Q8NA92 274 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 Q9H3A6 140 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 AAMDCQ9H7C9 122 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 OTORQ9NRC9 128 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 TMEM160Q9NX00 188 aa5.87□□□□□ -1.47
TRIM49B-202ENST00000622138 TIMM23O14925 209 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 LHBP01229 141 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 IGKV1-16P04430 117 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 TEX36Q5VZQ5 186 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 LINC00305Q7Z4B0 112 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 NDUFA11Q86Y39 141 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 DEFB123Q8N688 67 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 FAM216BQ8N7L0 139 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 TMEM75Q8N9X5 138 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 CHCHD5Q9BSY4 110 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 MRPL35Q9NZE8 188 aaKnown RBP5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 ARFGEF3Q5TH69 2177 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 TRAV12-1A0A0B4J245 112 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 GP9P14770 177 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 DEFB108BQ8NET1 73 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 NTN5Q8WTR8 489 aaPredicted RBP5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 GAFA1Q96PS6 74 aa5.86□□□□□ -1.47
TRIM49B-202ENST00000622138 NAV3Q8IVL0 2385 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 DMXL1Q9Y485 3027 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 H3BMM0 161 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 LGALS9O00182 355 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 IGLV2-11P01706 119 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 IGLC6P0CF74 106 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 HLA-DMBP28068 263 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 C22orf34Q6ZV56 151 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 C3orf56Q8N813 242 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 UBE2WQ96B02 151 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 CCL13Q99616 98 aa5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 RP1L1Q8IWN7 2480 aaPredicted RBP5.85□□□□□ -1.47
TRIM49B-202ENST00000622138 F8VRH5 84 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 INS-IGF2F8WCM5 200 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 UPK2O00526 184 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 P0DMU3 169 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 FAM231AP0DMU4 169 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 FAM231CP0DMU5 169 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 MZT1Q08AG7 82 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 IGFL2Q6UWQ7 119 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 PRNTQ86SH4 94 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 EDA2RQ9HAV5 297 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 CACNA1HO95180 2353 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 LAMA5O15230 3695 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 TRAV17A0A0B4J275 112 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 OOSP1A8MZH6 123 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 SAA1P0DJI8 122 aaPredicted RBP5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 EBI3Q14213 229 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 LYZL1Q6UWQ5 148 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 Q8N8P6 123 aa5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 EP300Q09472 2414 aaPredicted RBP5.84□□□□□ -1.47
TRIM49B-202ENST00000622138 MGAQ8IWI9 3026 aa5.84□□□□□ -1.48
TRIM49B-202ENST00000622138 FAM236AA0A1B0GUQ0 79 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 FAM236BA0A1B0GV22 79 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 E7EUB6 86 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 H7C1H1 209 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 IGHV1-46P01743 117 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 SUB1P53999 127 aaKnown RBP eCLIP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 TMEM155Q4W5P6 130 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 TMEM170BQ5T4T1 132 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 IGFBPL1Q8WX77 278 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 FAM215AQ9Y5M1 114 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 IGLV3-9A0A075B6K5 115 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 IGKV1D-37A0A075B6S9 117 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 MBD3L4A6NDZ8 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 MBD3L3A6NE82 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 MBD3L5A6NJ08 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 ORM1P02763 201 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 CRYGDP07320 174 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 CD3EP07766 207 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 CRYGAP11844 174 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 SRSF9Q13242 221 aaKnown RBP eCLIP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 ATXN8Q156A1 80 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 DEFB109BQ30KR1 87 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 C10orf55Q5SWW7 151 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 SFTA2Q6UW10 78 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 GOLT1AQ6ZVE7 132 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 MBD3L2Q8NHZ7 208 aaPredicted RBP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 FLYWCH2Q96CP2 140 aaKnown RBP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 DUX3Q96PT4 197 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 RNF7Q9UBF6 113 aa5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 RPUSD1Q9UJJ7 312 aaKnown RBP5.83□□□□□ -1.48
TRIM49B-202ENST00000622138 CNOT1A5YKK6 2376 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms