RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ANK3Q12955 4377 aaKnown RBP7.98□□□□□ -1.13
VPS11-208ENST00000621676 FAM223BA6NKX1 122 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 NDUFS6O75380 124 aaKnown RBP7.98□□□□□ -1.13
VPS11-208ENST00000621676 RNASEKQ6P5S7 137 aaKnown RBP7.98□□□□□ -1.13
VPS11-208ENST00000621676 FAM223AQ8IWN6 122 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 PRR25Q96S07 402 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 SRSF8Q9BRL6 282 aaKnown RBP7.98□□□□□ -1.13
VPS11-208ENST00000621676 BTF3L4Q96K17 158 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 RCHY1Q96PM5 261 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 MS4A6AQ9H2W1 248 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 NRN1Q9NPD7 142 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 IGLV1-40P01703 118 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 CRISP2P16562 243 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 PLP1P60201 277 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 RPP21Q9H633 154 aaKnown RBP7.97□□□□□ -1.13
VPS11-208ENST00000621676 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
VPS11-208ENST00000621676 IGHV7-4-1A0A0J9YVY3 117 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 RPL35AP18077 110 aaKnown RBP7.96□□□□□ -1.13
VPS11-208ENST00000621676 MYCNOSP40205 109 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 AMN1Q8IY45 258 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 C11orf52Q96A22 123 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 USMG5Q96IX5 58 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 JPT2Q9H910 190 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 SMPXQ9UHP9 88 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 TP53TG3Q9ULZ0 132 aa7.96□□□□□ -1.13
VPS11-208ENST00000621676 A0A087WWC5 75 aa7.96□□□□□ -1.14
VPS11-208ENST00000621676 GPHB5Q86YW7 130 aa7.96□□□□□ -1.14
VPS11-208ENST00000621676 LRRC75A-AS1Q8N1F1 130 aa7.96□□□□□ -1.14
VPS11-208ENST00000621676 XCL2Q9UBD3 114 aa7.96□□□□□ -1.14
VPS11-208ENST00000621676 SERF1AO75920 110 aa7.96□□□□□ -1.14
VPS11-208ENST00000621676 CD300EQ496F6 205 aaPredicted RBP7.96□□□□□ -1.14
VPS11-208ENST00000621676 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
VPS11-208ENST00000621676 GRAMD2BQ96HH9 432 aa7.96□□□□□ -1.14
VPS11-208ENST00000621676 KRTDAPP60985 99 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 OR10J6PQ8NGY7 276 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 NDFIP1Q9BT67 221 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 APCSP02743 223 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 TAS2R60P59551 318 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 OR10AG1Q8NH19 301 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 FMC1Q96HJ9 113 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 TCEAL7Q9BRU2 100 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.95□□□□□ -1.14
VPS11-208ENST00000621676 IFITM10A6NMD0 228 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 A8MWL6 223 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 NDUFA4O00483 81 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 LTAP01374 205 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 PSG9Q00887 426 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
VPS11-208ENST00000621676 C2orf70A6NJV1 201 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 CCL24O00175 119 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 PAFAH1B2P68402 229 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 TMEM208Q9BTX3 173 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 A0A087WWL8 130 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 PHOX2AO14813 284 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 PF4P02776 101 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 PRB2P02812 416 aaPredicted RBP7.94□□□□□ -1.14
VPS11-208ENST00000621676 MGPP08493 103 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 CD7P09564 240 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 SPANXN1Q5VSR9 72 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 PRSS57Q6UWY2 283 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 NEGR1Q7Z3B1 354 aa7.94□□□□□ -1.14
VPS11-208ENST00000621676 GAR1Q9NY12 217 aaKnown RBP7.94□□□□□ -1.14
VPS11-208ENST00000621676 A0A1W2PS18 150 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 F5H697 171 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 CD5LO43866 347 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 AMTP48728 403 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 S100A7AQ86SG5 101 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 FOXC2Q99958 501 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 TXNDC17Q9BRA2 123 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 TRBV24-1A0A075B6N3 115 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 LGALS1P09382 135 aaKnown RBP7.93□□□□□ -1.14
VPS11-208ENST00000621676 C16orf54Q6UWD8 224 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 TXN2Q99757 166 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 TMEM14CQ9P0S9 112 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 TCF21O43680 179 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 FAM162BQ5T6X4 162 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 ADAMTSL5Q6ZMM2 481 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 PACRGQ96M98 296 aaPredicted RBP7.93□□□□□ -1.14
VPS11-208ENST00000621676 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
VPS11-208ENST00000621676 CXorf65A6NEN9 183 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 CFHR3Q02985 330 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 MLST8Q9BVC4 326 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 LINC01619G3V211 115 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 C19orf54Q5BKX5 351 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 C14orf178Q8N769 122 aaPredicted RBP7.92□□□□□ -1.14
VPS11-208ENST00000621676 OR8A1Q8NGG7 326 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 TSKUQ8WUA8 353 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 C18orf15Q96N68 181 aa7.92□□□□□ -1.14
VPS11-208ENST00000621676 DEFB4AO15263 64 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 ANXA2RQ3ZCQ2 193 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 IGKV3D-20A0A0C4DH25 116 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 FABP5P3A8MUU1 101 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 FSHBP01225 129 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 IGHV3-53P01767 116 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 TMEM136Q6ZRR5 245 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 MBD6Q96DN6 1003 aa7.91□□□□□ -1.14
VPS11-208ENST00000621676 FOXL1Q12952 345 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms