RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 GOLGA4Q13439 2230 aaKnown RBP3.97□□□□□ -1.77
MATR3-228ENST00000620916 NCBP2LA6PVI3 153 aaKnown RBP3.96□□□□□ -1.78
MATR3-228ENST00000620916 HBDP02042 147 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 IGF1P05019 195 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
MATR3-228ENST00000620916 ERCC8Q13216 396 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 FXYD3Q14802 87 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 CALYQ9NYX4 217 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 Q9UF83 564 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 CABIN1Q9Y6J0 2220 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 SCN3AQ9NY46 2000 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 A0A0G2JNJ9 132 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 WI2-2373I1.2A0A1W2PRP0 233 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 LINC01549A6NIU2 74 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 H3BP45 60 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 CFHR3Q02985 330 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 TMEM155Q4W5P6 130 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 NDUFA11Q86Y39 141 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 FOXC2Q99958 501 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 Q9UFV3 132 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 AHCTF1Q8WYP5 2266 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 LOC400499M0QZD8 3231 aa3.96□□□□□ -1.78
MATR3-228ENST00000620916 HIGD1CA8MV81 97 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 MRPS12O15235 138 aaKnown RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 BUB3O43684 328 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 SLC25A16P16260 332 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 LORP23490 312 aaPredicted RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 FXYD4P59646 89 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 DEFB133Q30KQ1 61 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 ZNF793Q6ZN11 406 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 FP248Q71RG6 208 aaPredicted RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 MRPL55Q7Z7F7 128 aaKnown RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 RNF182Q8N6D2 247 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 C10orf105Q8TEF2 133 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 SRSF12Q8WXF0 261 aaKnown RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 PEMTQ9UBM1 199 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 DOPEY2Q9Y3R5 2298 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 IGLV1-36A0A0B4J1U3 117 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 LOC107984156A0A0G2JMH3 177 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 H3BSH0 61 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 PEX7O00628 323 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 P01737 135 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 ZNF816Q0VGE8 651 aaPredicted RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 ARL17AQ8IVW1 177 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 SFTPA2Q8IWL1 248 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 AICDAQ9GZX7 198 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 AAMDCQ9H7C9 122 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 DAZ1Q9NQZ3 744 aaKnown RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 ZNF492Q9P255 531 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 U3KQK5 164 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 ARID1BQ8NFD5 2236 aaPredicted RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 TRBV19A0A075B6N1 114 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 INS-IGF2F8WCM5 200 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 SS18L1O75177 396 aaPredicted RBP3.95□□□□□ -1.78
MATR3-228ENST00000620916 ERVK-16P61578 105 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 TFF3Q07654 80 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 TWIST1Q15672 202 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 ATXN8Q156A1 80 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 FAM104BQ5XKR9 115 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 DCAF4L2Q8NA75 395 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 OR8A1Q8NGG7 326 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 FMC1Q96HJ9 113 aa3.95□□□□□ -1.78
MATR3-228ENST00000620916 FBN2P35556 2912 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 USP9YO00507 2555 aaPredicted RBP3.94□□□□□ -1.78
MATR3-228ENST00000620916 A0A0D9SEW6 157 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 A0A0G2JRQ6 117 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 H3BVH4 76 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 M0R1B8 84 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
MATR3-228ENST00000620916 CTXN1P60606 82 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 KIF26BQ2KJY2 2108 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 TMEM52BQ4KMG9 183 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 CRIP3Q6Q6R5 217 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 ZNF497Q6ZNH5 498 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 C11orf44Q8N8P7 122 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 NT5CQ8TCD5 201 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 WFDC5Q8TCV5 224 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 METTL26Q96S19 204 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 ZNF71Q9NQZ8 489 aaPredicted RBP3.94□□□□□ -1.78
MATR3-228ENST00000620916 SLC25A15Q9Y619 301 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 TMSB15BA0A087X1C1 80 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 LINC00473A8K010 186 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 NPIPB11E5RHQ5 1161 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 FOXS1O43638 330 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 HERVK_113P61574 105 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 DEFB109BQ30KR1 87 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 VKORC1L1Q8N0U8 176 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 FAM168AQ92567 244 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 EMC6Q9BV81 110 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 AMMECR1Q9Y4X0 333 aaPredicted RBP3.94□□□□□ -1.78
MATR3-228ENST00000620916 LAMA5O15230 3695 aa3.94□□□□□ -1.78
MATR3-228ENST00000620916 IGHV5-10-1A0A0J9YXX1 117 aa3.93□□□□□ -1.78
MATR3-228ENST00000620916 PLAC8L1A1L4L8 177 aa3.93□□□□□ -1.78
MATR3-228ENST00000620916 KNCNA6PVL3 124 aa3.93□□□□□ -1.78
MATR3-228ENST00000620916 IAPPP10997 89 aa3.93□□□□□ -1.78
MATR3-228ENST00000620916 ZNF823P16415 610 aa3.93□□□□□ -1.78
MATR3-228ENST00000620916 SPANXN5Q5MJ07 72 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms