RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 NFE4Q86UQ8 179 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 PTTG2Q9NZH5 202 aa8.22□□□□□ -1.09
UPF3B-204ENST00000619445 ZNF266Q14584 549 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 KHDC3LQ587J8 217 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 FAM74A1Q5RGS3 127 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 ARL6IP6Q8N6S5 226 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 MAPKAPK5-AS1Q8N8E1 139 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 TMED6Q8WW62 240 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 FXYD5Q96DB9 178 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 ATP5SQ99766 215 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 SPXQ9BT56 116 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.1
UPF3B-204ENST00000619445 TRGV11A0A075B6L2 103 aa8.2□□□□□ -1.1
UPF3B-204ENST00000619445 UPK1BO75841 260 aa8.2□□□□□ -1.1
UPF3B-204ENST00000619445 IFNA5P01569 189 aa8.2□□□□□ -1.1
UPF3B-204ENST00000619445 UBE2L3P68036 154 aaKnown RBP8.2□□□□□ -1.1
UPF3B-204ENST00000619445 LRRC37A5PQ49AS3 106 aa8.2□□□□□ -1.1
UPF3B-204ENST00000619445 NEGR1Q7Z3B1 354 aa8.2□□□□□ -1.1
UPF3B-204ENST00000619445 IQCF2Q8IXL9 164 aa8.2□□□□□ -1.1
UPF3B-204ENST00000619445 SCGB1C1Q8TD33 95 aa8.2□□□□□ -1.1
UPF3B-204ENST00000619445 INMT-MINDY4F8WBC2 141 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 NXPH4O95158 308 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 ORM1P02763 201 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 OR10J4P0C629 311 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 CRYBA4P53673 196 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 LINC00315P59091 139 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 RANP62826 216 aaKnown RBP8.19□□□□□ -1.1
UPF3B-204ENST00000619445 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 FAM159AQ6UWV7 190 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 Q8N1X5 172 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 PCNPQ8WW12 178 aaKnown RBP8.19□□□□□ -1.1
UPF3B-204ENST00000619445 PHYHIPLQ96FC7 376 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 OR5AC2Q9NZP5 309 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 TP53TG3Q9ULZ0 132 aa8.19□□□□□ -1.1
UPF3B-204ENST00000619445 HSPG2P98160 4391 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 LRP1BQ9NZR2 4599 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 TRGV4A0A0C4DH28 118 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 SIX6O95475 246 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 DEFA1P59665 94 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 DEFA3P59666 94 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 ERVFC1-1P60608 527 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 FFAR4Q5NUL3 377 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 Q6AWC8 147 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 OR10G4Q8NGN3 311 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 CMTM2Q8TAZ6 248 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 PPP1R1CQ8WVI7 109 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 RASL10AQ92737 203 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 TXNDC17Q9BRA2 123 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
UPF3B-204ENST00000619445 HSPB11Q9Y547 144 aa8.18□□□□□ -1.1
UPF3B-204ENST00000619445 DIRC3C9JPN6 131 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 H0YIZ8 118 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 SRIP30626 198 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 FHL2Q14192 279 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 TDRG1Q3Y452 100 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 PRR9Q5T870 116 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 PQLC2Q6ZP29 291 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 Q8TAT8 98 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 MARVELD1Q9BSK0 173 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 OTORQ9NRC9 128 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 LY96Q9Y6Y9 160 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 ABCA13Q86UQ4 5058 aa8.17□□□□□ -1.1
UPF3B-204ENST00000619445 C9JCJ5 164 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 SSNA1O43805 119 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 MPC2O95563 127 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 IGHV3-53P01767 116 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 EVI2AP22794 236 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 ACOT6Q3I5F7 207 aaPredicted RBP8.16□□□□□ -1.1
UPF3B-204ENST00000619445 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 C8orf49Q96NF6 230 aa8.16□□□□□ -1.1
UPF3B-204ENST00000619445 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 SERTM2A0A1B0GWG4 89 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 A0A1W2PPV4 95 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 CIDEAO60543 219 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 RPL12P30050 165 aaKnown RBP8.15□□□□□ -1.1
UPF3B-204ENST00000619445 H2BFSP57053 126 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 TMEM183BQ1AE95 376 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 MUC21Q5SSG8 566 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
UPF3B-204ENST00000619445 TMEM183AQ8IXX5 376 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 KCNS1Q96KK3 526 aa8.15□□□□□ -1.1
UPF3B-204ENST00000619445 TRAV4A0A0B4J268 109 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 M0R2P5 195 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 NDFIP1Q9BT67 221 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 SCRT2Q9NQ03 307 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 MDFICQ9P1T7 246 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 MBD2Q9UBB5 411 aa8.14□□□□□ -1.11
UPF3B-204ENST00000619445 PGPA6NDG6 321 aa8.13□□□□□ -1.11
UPF3B-204ENST00000619445 K7EQD1 137 aa8.13□□□□□ -1.11
UPF3B-204ENST00000619445 GYPEP15421 78 aa8.13□□□□□ -1.11
UPF3B-204ENST00000619445 TIRAPP58753 221 aa8.13□□□□□ -1.11
UPF3B-204ENST00000619445 OR4C5Q8NGB2 326 aa8.13□□□□□ -1.11
UPF3B-204ENST00000619445 HYLS1Q96M11 299 aa8.13□□□□□ -1.11
UPF3B-204ENST00000619445 SDF2L1Q9HCN8 221 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms