RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 HLA-DRB4X5D2U9 266 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 AGRNO00468 2067 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
CCDC144B-208ENST00000618081 ZNRF2Q8NHG8 242 aa8.96□□□□□ -0.97
CCDC144B-208ENST00000618081 ZNF492Q9P255 531 aa8.96□□□□□ -0.97
CCDC144B-208ENST00000618081 KNCNA6PVL3 124 aa8.96□□□□□ -0.97
CCDC144B-208ENST00000618081 IGHG4P01861 327 aa8.96□□□□□ -0.97
CCDC144B-208ENST00000618081 LOC105371267A0A1B0GV96 52 aa8.96□□□□□ -0.98
CCDC144B-208ENST00000618081 CLPSP04118 112 aa8.96□□□□□ -0.98
CCDC144B-208ENST00000618081 STPG4Q8N801 248 aa8.96□□□□□ -0.98
CCDC144B-208ENST00000618081 Q8N8P6 123 aa8.96□□□□□ -0.98
CCDC144B-208ENST00000618081 IGFL3Q6UXB1 125 aa8.96□□□□□ -0.98
CCDC144B-208ENST00000618081 EGR2P11161 476 aaPredicted RBP8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 HGFACQ04756 655 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 C3orf79P0CE67 100 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 SMIM2Q9BVW6 85 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 TCF15Q12870 199 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 UTF1Q5T230 341 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 NAA38Q9BRA0 125 aaKnown RBP8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 TRAV12-2A0A075B6T6 113 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 C2orf66Q6UXQ4 117 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 ADAMTSL5Q6ZMM2 481 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 OR11H6Q8NGC7 330 aa8.95□□□□□ -0.98
CCDC144B-208ENST00000618081 TMEM256Q8N2U0 113 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 IGKV2D-24A0A075B6R9 120 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 RHOHQ15669 191 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 MRAPQ8TCY5 172 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 QRFPP83859 136 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 CFPP27918 469 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 PRR30Q53SZ7 412 aaPredicted RBP8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 MPV17L2Q567V2 206 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 REG4Q9BYZ8 158 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 CFHR4Q92496 578 aa8.94□□□□□ -0.98
CCDC144B-208ENST00000618081 COLCA2A8K830 154 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 LYL1P12980 280 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 TRBV19A0A075B6N1 114 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 H3BUA1 57 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 UBE2V1Q13404 147 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 NCOR1P1Q9H4R4 102 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 TMEM14CQ9P0S9 112 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 HAMPP81172 84 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 G3V318 75 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 CCL24O00175 119 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 LINC00205P59089 165 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 CYTL1Q9NRR1 136 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 ELANEP08246 267 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 CLPSL2Q6UWE3 100 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 MRPL53Q96EL3 112 aaKnown RBP8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 VPREB3Q9UKI3 123 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 C9orf66Q5T8R8 295 aa8.93□□□□□ -0.98
CCDC144B-208ENST00000618081 IGHV7-4-1A0A0J9YVY3 117 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 SH2D6Q7Z4S9 175 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 LINC00479Q96M42 142 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 LMO1P25800 156 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 FOXI2Q6ZQN5 318 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 CRIPAKQ8N1N5 446 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 PRR31Q5SQ13 230 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 HIVEP2P31629 2446 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 TEX36Q5VZQ5 186 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 NXPH4O95158 308 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 IGKV1-39P01597 117 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 IGKV1D-39P04432 117 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 FGF6P10767 208 aa8.92□□□□□ -0.98
CCDC144B-208ENST00000618081 FOXL2NBQ6ZUU3 175 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 IGHV3-38A0A0C4DH36 116 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 TMEM213A2RRL7 107 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 C5orf63A6NC05 138 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 RNF152Q8N8N0 203 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 MRPL51Q4U2R6 128 aaKnown RBP8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 NOP10Q9NPE3 64 aaKnown RBP8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 BOD1L2Q8IYS8 172 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 LINC00311Q8N616 119 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 C1orf43Q9BWL3 253 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 EXPH5Q8NEV8 1989 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 H3BRN7 92 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 Q0VG73 95 aa8.91□□□□□ -0.98
CCDC144B-208ENST00000618081 COL4A6Q14031 1691 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 PYGO2Q9BRQ0 406 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 K7EMI3 77 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 BUB3O43684 328 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 XCL1P47992 114 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 MLANAQ16655 118 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 PRR25Q96S07 402 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 ZNRD1Q9P1U0 126 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 F8W1H4 67 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 BVES-AS1Q5T3Y7 98 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 MORN5Q5VZ52 161 aa8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 RAI1Q7Z5J4 1906 aaPredicted RBP8.9□□□□□ -0.98
CCDC144B-208ENST00000618081 IGKV1OR2-108A0A075B7D4 117 aa8.9□□□□□ -0.99
CCDC144B-208ENST00000618081 PRO1854Q9UHT4 67 aa8.9□□□□□ -0.99
CCDC144B-208ENST00000618081 FUSP35637 526 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCDC144B-208ENST00000618081 A0A096LPF7 62 aa8.89□□□□□ -0.99
CCDC144B-208ENST00000618081 BDP1A6H8Y1 2624 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms