RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 TIMM8BQ9Y5J9 83 aaPredicted RBP17.66■□□□□ 0.42
PMS1-220ENST00000618056 HMGB3O15347 200 aaKnown RBP17.65■□□□□ 0.42
PMS1-220ENST00000618056 ARL14EPLP0DKL9 152 aa17.65■□□□□ 0.42
PMS1-220ENST00000618056 ZNF138P52744 262 aa17.65■□□□□ 0.42
PMS1-220ENST00000618056 CCDC28AQ8IWP9 274 aa17.65■□□□□ 0.42
PMS1-220ENST00000618056 ZFAND2AQ8N6M9 145 aa17.65■□□□□ 0.42
PMS1-220ENST00000618056 NDUFAF3Q9BU61 184 aa17.65■□□□□ 0.42
PMS1-220ENST00000618056 DIRC3C9JPN6 131 aa17.64■□□□□ 0.41
PMS1-220ENST00000618056 ZNF324O75467 553 aaPredicted RBP17.64■□□□□ 0.41
PMS1-220ENST00000618056 ARL6IP6Q8N6S5 226 aa17.64■□□□□ 0.41
PMS1-220ENST00000618056 GPX1P07203 203 aa17.63■□□□□ 0.41
PMS1-220ENST00000618056 BTN1A1Q13410 526 aa17.63■□□□□ 0.41
PMS1-220ENST00000618056 SUN5Q8TC36 379 aa17.63■□□□□ 0.41
PMS1-220ENST00000618056 LINC00467Q9BRT7 94 aa17.63■□□□□ 0.41
PMS1-220ENST00000618056 PGPA6NDG6 321 aa17.63■□□□□ 0.41
PMS1-220ENST00000618056 ACTR3CQ9C0K3 210 aaPredicted RBP17.63■□□□□ 0.41
PMS1-220ENST00000618056 RAB19A4D1S5 217 aa17.62■□□□□ 0.41
PMS1-220ENST00000618056 UMAD1C9J7I0 102 aa17.62■□□□□ 0.41
PMS1-220ENST00000618056 RNASE4P34096 147 aaKnown RBP17.62■□□□□ 0.41
PMS1-220ENST00000618056 CMTM2Q8TAZ6 248 aa17.62■□□□□ 0.41
PMS1-220ENST00000618056 DEFB130BP0DP73 79 aa17.61■□□□□ 0.41
PMS1-220ENST00000618056 DEFB130AP0DP74 79 aa17.61■□□□□ 0.41
PMS1-220ENST00000618056 HTN3P15516 51 aa17.61■□□□□ 0.41
PMS1-220ENST00000618056 GCHFRP30047 84 aa17.61■□□□□ 0.41
PMS1-220ENST00000618056 UQCC3Q6UW78 93 aa17.61■□□□□ 0.41
PMS1-220ENST00000618056 Q8TAT8 98 aa17.61■□□□□ 0.41
PMS1-220ENST00000618056 NOP10Q9NPE3 64 aaKnown RBP17.61■□□□□ 0.41
PMS1-220ENST00000618056 LENEPQ9Y5L5 61 aa17.61■□□□□ 0.41
PMS1-220ENST00000618056 PRR9Q5T870 116 aa17.6■□□□□ 0.41
PMS1-220ENST00000618056 CXorf1O96002 111 aa17.59■□□□□ 0.41
PMS1-220ENST00000618056 TMEM167BQ9NRX6 74 aa17.59■□□□□ 0.41
PMS1-220ENST00000618056 CBY3A6NI87 242 aa17.58■□□□□ 0.41
PMS1-220ENST00000618056 SNURFLB1AK76 121 aa17.58■□□□□ 0.41
PMS1-220ENST00000618056 KRBOX1C9JBD0 128 aa17.58■□□□□ 0.41
PMS1-220ENST00000618056 ANXA2RQ3ZCQ2 193 aa17.58■□□□□ 0.41
PMS1-220ENST00000618056 AKR1C8PQ5T2L2 129 aa17.58■□□□□ 0.41
PMS1-220ENST00000618056 LINC00612Q8N6U2 182 aa17.58■□□□□ 0.41
PMS1-220ENST00000618056 FAM213BQ8TBF2 198 aa17.58■□□□□ 0.41
PMS1-220ENST00000618056 SSX7Q7RTT5 188 aa17.57■□□□□ 0.4
PMS1-220ENST00000618056 ATP5G1P05496 136 aa17.56■□□□□ 0.4
PMS1-220ENST00000618056 ATP5G3P48201 142 aa17.56■□□□□ 0.4
PMS1-220ENST00000618056 DAZ2Q13117 558 aaKnown RBP17.56■□□□□ 0.4
PMS1-220ENST00000618056 DPPA3Q6W0C5 159 aa17.56■□□□□ 0.4
PMS1-220ENST00000618056 GOLT1AQ6ZVE7 132 aa17.56■□□□□ 0.4
PMS1-220ENST00000618056 CTXND1A0A1B0GTU2 59 aa17.56■□□□□ 0.4
PMS1-220ENST00000618056 ZNF726P1Q15940 193 aa17.56■□□□□ 0.4
PMS1-220ENST00000618056 C11orf72Q8NBR9 251 aa17.56■□□□□ 0.4
PMS1-220ENST00000618056 P0DMU3 169 aa17.55■□□□□ 0.4
PMS1-220ENST00000618056 FAM231AP0DMU4 169 aa17.55■□□□□ 0.4
PMS1-220ENST00000618056 FAM231CP0DMU5 169 aa17.55■□□□□ 0.4
PMS1-220ENST00000618056 TMEM88Q6PEY1 159 aa17.55■□□□□ 0.4
PMS1-220ENST00000618056 LYPD6BQ8NI32 183 aa17.55■□□□□ 0.4
PMS1-220ENST00000618056 RPH3ALQ9UNE2 315 aa17.55■□□□□ 0.4
PMS1-220ENST00000618056 MUC4Q99102 2169 aa17.54■□□□□ 0.4
PMS1-220ENST00000618056 IGHV1OR15-1A0A075B7D0 117 aa17.54■□□□□ 0.4
PMS1-220ENST00000618056 SERTM2A0A1B0GWG4 89 aa17.54■□□□□ 0.4
PMS1-220ENST00000618056 Q6AWC8 147 aa17.54■□□□□ 0.4
PMS1-220ENST00000618056 C5orf17Q8NAS9 161 aa17.54■□□□□ 0.4
PMS1-220ENST00000618056 FHITP49789 147 aa17.53■□□□□ 0.4
PMS1-220ENST00000618056 GNG5P63218 68 aa17.53■□□□□ 0.4
PMS1-220ENST00000618056 IBA57Q5T440 356 aaKnown RBP17.53■□□□□ 0.4
PMS1-220ENST00000618056 Q6ZQT7 251 aa17.53■□□□□ 0.4
PMS1-220ENST00000618056 GSN-AS1Q9NRJ2 163 aa17.52■□□□□ 0.4
PMS1-220ENST00000618056 GGTLC3B5MD39 225 aa17.51■□□□□ 0.39
PMS1-220ENST00000618056 F5H768 121 aa17.51■□□□□ 0.39
PMS1-220ENST00000618056 C15orf53Q8NAA6 179 aa17.51■□□□□ 0.39
PMS1-220ENST00000618056 FRAS1Q86XX4 4008 aa17.51■□□□□ 0.39
PMS1-220ENST00000618056 EPPK1P58107 5090 aaKnown RBP17.51■□□□□ 0.39
PMS1-220ENST00000618056 TRAV8-1A0A0A6YYK1 113 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 A0A1W2PRE2 83 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 TCRAP04437 139 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 TCL1AP56279 114 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 TREM1Q9NP99 234 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 NACAE9PAV3 2078 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 SUMO1P63165 101 aaKnown RBP17.5■□□□□ 0.39
PMS1-220ENST00000618056 POM121L12Q8N7R1 296 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 TP53TG3Q9ULZ0 132 aa17.5■□□□□ 0.39
PMS1-220ENST00000618056 GAGE12BA1L429 117 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 GAGE7O76087 117 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 H2AFB1P0C5Y9 115 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 GAGE12FP0CL80 117 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 GAGE12GP0CL81 117 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 GAGE12IP0CL82 117 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 Q6ZTI0 123 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 IQCF2Q8IXL9 164 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 TVP23CQ96ET8 276 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 C18orf15Q96N68 181 aa17.49■□□□□ 0.39
PMS1-220ENST00000618056 K7EQM0 130 aa17.48■□□□□ 0.39
PMS1-220ENST00000618056 EPDR1Q9UM22 224 aa17.48■□□□□ 0.39
PMS1-220ENST00000618056 KLF12Q9Y4X4 402 aa17.48■□□□□ 0.39
PMS1-220ENST00000618056 TMPRSS5Q9H3S3 457 aa17.47■□□□□ 0.39
PMS1-220ENST00000618056 DNAH10Q8IVF4 4471 aa17.46■□□□□ 0.39
PMS1-220ENST00000618056 TMEM218A2RU14 115 aa17.46■□□□□ 0.39
PMS1-220ENST00000618056 MAP1LC3B2A6NCE7 125 aa17.46■□□□□ 0.39
PMS1-220ENST00000618056 SPINK4O60575 86 aa17.46■□□□□ 0.39
PMS1-220ENST00000618056 FGF8P55075 233 aaPredicted RBP17.46■□□□□ 0.39
PMS1-220ENST00000618056 TDRG1Q3Y452 100 aa17.46■□□□□ 0.39
PMS1-220ENST00000618056 CYB561D1Q8N8Q1 229 aa17.46■□□□□ 0.39
PMS1-220ENST00000618056 MAP1LC3BQ9GZQ8 125 aa17.46■□□□□ 0.39
PMS1-220ENST00000618056 SRSF3P84103 164 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms