RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 MFAP4P55083 255 aa11.31□□□□□ -0.6
SHROOM1-208ENST00000617339 C21orf62Q9NYP8 219 aa11.31□□□□□ -0.6
SHROOM1-208ENST00000617339 CRYGBP07316 175 aa11.31□□□□□ -0.6
SHROOM1-208ENST00000617339 SAMD5Q5TGI4 173 aa11.31□□□□□ -0.6
SHROOM1-208ENST00000617339 LY6LH3BQJ8 138 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 NPFFO15130 113 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 C15orf32Q32M92 178 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 CFHR4Q92496 578 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 NDFIP1Q9BT67 221 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 AAMDCQ9H7C9 122 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 J3QR89 54 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 FGF6P10767 208 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 PSG3Q16557 428 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 NEGR1Q7Z3B1 354 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
SHROOM1-208ENST00000617339 IGKV2-40A0A087WW87 121 aaPredicted RBP11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 IGKV2D-40P01614 121 aaPredicted RBP11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 TRGV9Q99603 122 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 TMEM8BA6NDV4 472 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 CT45A10P0DMU9 189 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 SRD5A1P18405 259 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 HSD52Q0P140 79 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 A0A1B0GUT8 65 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 TCRAP04437 139 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 THAP8Q8NA92 274 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 SIGMAR1Q99720 223 aa11.29□□□□□ -0.6
SHROOM1-208ENST00000617339 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 FANCD2OSQ96PS1 177 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 D6R8Y8 96 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 HIST2H2BDQ6DRA6 164 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 C8orf31Q8N9H6 132 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 K7EQM0 130 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 HTN1P15515 57 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 RNF182Q8N6D2 247 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 PRSS22Q9GZN4 317 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
SHROOM1-208ENST00000617339 SMIM13P0DJ93 91 aa11.27□□□□□ -0.6
SHROOM1-208ENST00000617339 FXYD2P54710 66 aa11.27□□□□□ -0.6
SHROOM1-208ENST00000617339 SH2D6Q7Z4S9 175 aa11.27□□□□□ -0.6
SHROOM1-208ENST00000617339 MLST8Q9BVC4 326 aa11.27□□□□□ -0.6
SHROOM1-208ENST00000617339 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.6
SHROOM1-208ENST00000617339 C19orf71A6NCJ1 209 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 LMO4P61968 165 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 ZNF562Q6V9R5 426 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 TMEM213A2RRL7 107 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 CRYGCP07315 174 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 GP9P14770 177 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 C8orf49Q96NF6 230 aa11.27□□□□□ -0.61
SHROOM1-208ENST00000617339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 M0R1W7 72 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 DEFB1P60022 68 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 WFDC2Q14508 124 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 AMN1Q8IY45 258 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 RIGQ13278 110 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 TMEM75Q8N9X5 138 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 OR5A1Q8NGJ0 315 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 LTAP01374 205 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 CKS1BP61024 79 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 Q86TA4 180 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 DTX2Q86UW9 622 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 BOD1L2Q8IYS8 172 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 SIGLEC8Q9NYZ4 499 aa11.26□□□□□ -0.61
SHROOM1-208ENST00000617339 CENPVL3A0A0U1RRI6 287 aa11.25□□□□□ -0.61
SHROOM1-208ENST00000617339 MSMBP08118 114 aa11.25□□□□□ -0.61
SHROOM1-208ENST00000617339 FLNAP21333 2647 aaKnown RBP11.25□□□□□ -0.61
SHROOM1-208ENST00000617339 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
SHROOM1-208ENST00000617339 SPRY2O43597 315 aa11.25□□□□□ -0.61
SHROOM1-208ENST00000617339 FSTL3O95633 263 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 MYCNOSP40205 109 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 ETDBQ3ZM63 59 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 PRELID3AQ96N28 172 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 B4DSR2 109 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 BLCAPP62952 87 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 Q8N9W7 124 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 Q96MF0 132 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 ITPR3Q14573 2671 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 A0A096LNJ9 63 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 GAGE12HA6NDE8 117 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 RAB9AP51151 201 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 ERCC8Q13216 396 aa11.24□□□□□ -0.61
SHROOM1-208ENST00000617339 Q6ZS46 218 aa11.23□□□□□ -0.61
SHROOM1-208ENST00000617339 SIRPDQ9H106 197 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms