RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 IGHV3-30-3P0DP02 117 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 RHOHQ15669 191 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 PRR25Q96S07 402 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 MED12Q93074 2177 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 FAM236AA0A1B0GUQ0 79 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 FAM236BA0A1B0GV22 79 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 J3QRE1 110 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 MST1P26927 711 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 C12orf74Q32Q52 190 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 ZNF493Q6ZR52 646 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 C9orf47Q6ZRZ4 202 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 LTBP4Q8N2S1 1624 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 IGHV4OR15-8A0A075B7B6 117 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 A0A087WW49 117 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 IGLL5B9A064 214 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 YPEL3P61236 119 aaPredicted RBP4.79□□□□□ -1.64
RFX3-212ENST00000617270 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 CACNA1HO95180 2353 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 NCR3O14931 201 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 MYOFQ9NZM1 2061 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 PRSS47A8MTI9 375 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 H0Y9J4 135 aa4.79□□□□□ -1.64
RFX3-212ENST00000617270 DOCK11Q5JSL3 2073 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 USF3Q68DE3 2245 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 IGHV1-69DA0A0B4J2H0 117 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 IGHV1-69P01742 117 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 LGALS9BQ3B8N2 356 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 LGALS9CQ6DKI2 356 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 FNDC10F2Z333 226 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.78□□□□□ -1.64
RFX3-212ENST00000617270 Q6ZVH6 145 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 LAMB2P55268 1798 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 YLPM1P49750 1951 aaKnown RBP4.78□□□□□ -1.64
RFX3-212ENST00000617270 IGKV4-1P06312 121 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 POU2AF1Q16633 256 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 CR1LQ2VPA4 569 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 C4orf48Q5BLP8 95 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 NDUFS7O75251 213 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 HIST2H2BCQ6DN03 193 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 PLXNB2O15031 1838 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 Q0VFX4 171 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 DAND5Q8N907 189 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 PNRC2Q9NPJ4 139 aaKnown RBP4.78□□□□□ -1.64
RFX3-212ENST00000617270 BCORQ6W2J9 1755 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 KIF13BQ9NQT8 1826 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 NDUFA4O00483 81 aa4.78□□□□□ -1.64
RFX3-212ENST00000617270 MRPL53Q96EL3 112 aaKnown RBP4.78□□□□□ -1.64
RFX3-212ENST00000617270 V9GYV3 84 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 TRBV6-6A0A0A6YYG2 114 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 SMIM27A0A1W2PRY6 76 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 H3BRN7 92 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 SPRY2O43597 315 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 NDUFA4L2Q9NRX3 87 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 ZFP36L1Q07352 338 aaKnown RBP4.77□□□□□ -1.65
RFX3-212ENST00000617270 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
RFX3-212ENST00000617270 OPRPNQ99935 248 aaPredicted RBP4.77□□□□□ -1.65
RFX3-212ENST00000617270 ADAMTSL3P82987 1691 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 STRCP1A6NGW2 1772 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 ETV2O00321 342 aaPredicted RBP4.77□□□□□ -1.65
RFX3-212ENST00000617270 PRR30Q53SZ7 412 aaPredicted RBP4.77□□□□□ -1.65
RFX3-212ENST00000617270 UNQ6494/PRO21346Q6UXR6 183 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 IGHV7-4-1A0A0J9YVY3 117 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 GNRH2O43555 120 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 CSRP3P50461 194 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 ANKRD39Q53RE8 183 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 NCOR1P1Q9H4R4 102 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 TMEM14BQ9NUH8 114 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 U3KQE9 123 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 SEM1Q6ZVN7 128 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 SH2D6Q7Z4S9 175 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 PCP2Q8IVA1 136 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 ADAMTSL1Q8N6G6 1762 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 ESM1Q9NQ30 184 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 ICOSQ9Y6W8 199 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 E7EQL1 145 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 K7EMI3 77 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 GYPEP15421 78 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 VWCEQ96DN2 955 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 SND1-IT1Q9HBX3 110 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 TPSG1Q9NRR2 321 aa4.77□□□□□ -1.65
RFX3-212ENST00000617270 RIF1Q5UIP0 2472 aaKnown RBP4.77□□□□□ -1.65
RFX3-212ENST00000617270 GATA3P23771 443 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 DEFB136Q30KP8 78 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 C20orf78Q9BR46 151 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 PKIGQ9Y2B9 76 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 IGLC7A0M8Q6 106 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 ATOX1O00244 68 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 IGLV3-19P01714 112 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 IGHV2-70DA0A0C4DH43 119 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 C9JQL5 133 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 MRPL55Q7Z7F7 128 aaKnown RBP4.76□□□□□ -1.65
RFX3-212ENST00000617270 GTF3C1Q12789 2109 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 CD59P13987 128 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 NPBQ8NG41 125 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 FLVCR1-AS1Q8TAF5 88 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 MRPL36Q9P0J6 103 aaKnown RBP4.76□□□□□ -1.65
RFX3-212ENST00000617270 PTPRFP10586 1907 aa4.76□□□□□ -1.65
RFX3-212ENST00000617270 ARAP2Q8WZ64 1704 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms