RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 BUB3O43684 328 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 CD3EP07766 207 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
GPN1-212ENST00000616939 SH2D6Q7Z4S9 175 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 TMEM238LA0A1B0GVL6 79 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 A6NJY4 79 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 GOSR1O95249 250 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 C9orf47Q6ZRZ4 202 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 AGPAT4-IT1Q9H0P7 198 aa11.97□□□□□ -0.49
GPN1-212ENST00000616939 PRTN3P24158 256 aa11.96□□□□□ -0.49
GPN1-212ENST00000616939 PPIFP30405 207 aaKnown RBP11.96□□□□□ -0.49
GPN1-212ENST00000616939 HES1Q14469 280 aa11.96□□□□□ -0.49
GPN1-212ENST00000616939 NEXN-AS1Q8NBZ9 246 aa11.96□□□□□ -0.49
GPN1-212ENST00000616939 FAM110DQ8TAY7 271 aaPredicted RBP11.96□□□□□ -0.49
GPN1-212ENST00000616939 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
GPN1-212ENST00000616939 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.49
GPN1-212ENST00000616939 NCOR1O75376 2440 aa11.96□□□□□ -0.49
GPN1-212ENST00000616939 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 HOXA3O43365 443 aaPredicted RBP11.95□□□□□ -0.5
GPN1-212ENST00000616939 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
GPN1-212ENST00000616939 TMEM78Q5T7P6 136 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
GPN1-212ENST00000616939 LENEPQ9Y5L5 61 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 LYNX1G3V0Z9 82 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 LYNX1P0DP58 116 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 KLRD1Q13241 179 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
GPN1-212ENST00000616939 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
GPN1-212ENST00000616939 M0R381 172 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 UBE2D1P51668 147 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 EFNA4P52798 201 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 MINOS1Q5TGZ0 78 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 LYRM7Q5U5X0 104 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 AMTNQ6UX39 209 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 MTURNQ8N3F0 131 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 UFC1Q9Y3C8 167 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 MINOS1-NBL1R4GNA1 71 aa11.94□□□□□ -0.5
GPN1-212ENST00000616939 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 APOMO95445 188 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 FOXI1Q12951 378 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 C1orf122Q6ZSJ8 110 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 SVIPQ8NHG7 77 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 VCX2Q9H322 139 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 DSPP15924 2871 aaKnown RBP11.93□□□□□ -0.5
GPN1-212ENST00000616939 IGHV7-81A0A0B4J1V7 117 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 CKS1BP61024 79 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 SPANXN1Q5VSR9 72 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 RNF182Q8N6D2 247 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 SCGB3A1Q96QR1 104 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
GPN1-212ENST00000616939 CELSR3Q9NYQ7 3312 aa11.92□□□□□ -0.5
GPN1-212ENST00000616939 TRAV26-2A0A0B4J265 109 aa11.92□□□□□ -0.5
GPN1-212ENST00000616939 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.92□□□□□ -0.5
GPN1-212ENST00000616939 CLPSL1A2RUU4 121 aa11.92□□□□□ -0.5
GPN1-212ENST00000616939 MED14OSP0DP75 135 aa11.92□□□□□ -0.5
GPN1-212ENST00000616939 MRPL16Q9NX20 251 aaKnown RBP11.92□□□□□ -0.5
GPN1-212ENST00000616939 LINC01549A6NIU2 74 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 UBE2D3P61077 147 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 SUMO2P61956 95 aaKnown RBP11.91□□□□□ -0.5
GPN1-212ENST00000616939 UBE2D2P62837 147 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 CYSLTR1Q9Y271 337 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 U3KQE9 123 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 PKDREJQ9NTG1 2253 aa11.91□□□□□ -0.5
GPN1-212ENST00000616939 COX6B1P14854 86 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 VMO1Q7Z5L0 202 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 DMDP11532 3685 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 PPP1R17O96001 155 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 SMCPP49901 116 aaPredicted RBP11.9□□□□□ -0.5
GPN1-212ENST00000616939 RPL32P62910 135 aaKnown RBP11.9□□□□□ -0.5
GPN1-212ENST00000616939 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.5
GPN1-212ENST00000616939 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 CDIP1Q9H305 208 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 DPH3P1Q9H4G8 78 aa11.9□□□□□ -0.5
GPN1-212ENST00000616939 INSL3P51460 131 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 CRYBA4P53673 196 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 PAPPA-AS1Q5QFB9 102 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 Q8N9W7 124 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 RASL10AQ92737 203 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 TIMD4Q96H15 378 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 ROS1P08922 2347 aa11.89□□□□□ -0.51
GPN1-212ENST00000616939 IGHV1-69DA0A0B4J2H0 117 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 C15orf32Q32M92 178 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 DEFB123Q8N688 67 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 POM121L12Q8N7R1 296 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 METTL26Q96S19 204 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 H3BVH4 76 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 TSPAN13O95857 204 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 PPDPFLQ8WWR9 84 aa11.88□□□□□ -0.51
GPN1-212ENST00000616939 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
GPN1-212ENST00000616939 CD7P09564 240 aa11.87□□□□□ -0.51
GPN1-212ENST00000616939 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms