RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PSG8Q9UQ74 426 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 KLK5Q9Y337 293 aaPredicted RBP10.82□□□□□ -0.68
UBXN1-218ENST00000616865 TRAV8-1A0A0A6YYK1 113 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 A8MTW9 85 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 J3KRW8 73 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 M0R2Z0 102 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 CEBPGP53567 150 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 LINC00479Q96M42 142 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 ZNF492Q9P255 531 aa10.81□□□□□ -0.68
UBXN1-218ENST00000616865 GPX1P07203 203 aa10.8□□□□□ -0.68
UBXN1-218ENST00000616865 CDKN1BP46527 198 aa10.8□□□□□ -0.68
UBXN1-218ENST00000616865 AMTNQ6UX39 209 aa10.8□□□□□ -0.68
UBXN1-218ENST00000616865 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
UBXN1-218ENST00000616865 TREM1Q9NP99 234 aa10.8□□□□□ -0.68
UBXN1-218ENST00000616865 LENEPQ9Y5L5 61 aa10.8□□□□□ -0.68
UBXN1-218ENST00000616865 AGRNO00468 2067 aa10.8□□□□□ -0.68
UBXN1-218ENST00000616865 HECTD4Q9Y4D8 3996 aa10.79□□□□□ -0.68
UBXN1-218ENST00000616865 INSP01308 110 aa10.79□□□□□ -0.68
UBXN1-218ENST00000616865 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
UBXN1-218ENST00000616865 RNF183Q96D59 192 aa10.79□□□□□ -0.68
UBXN1-218ENST00000616865 PCLOQ9Y6V0 5065 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 TRAV12-2A0A075B6T6 113 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 TRBV7-9A0A0J9YWB2 115 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
UBXN1-218ENST00000616865 TMEM183BQ1AE95 376 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 ZNF674Q2M3X9 581 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 Q86TA4 180 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 C2CD4CQ8TF44 421 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 TMEM208Q9BTX3 173 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 ZFP30Q9Y2G7 519 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 GOLT1BQ9Y3E0 138 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
UBXN1-218ENST00000616865 VPS13DQ5THJ4 4388 aa10.77□□□□□ -0.68
UBXN1-218ENST00000616865 RAB19A4D1S5 217 aa10.77□□□□□ -0.69
UBXN1-218ENST00000616865 RPL35P42766 123 aaKnown RBP10.77□□□□□ -0.69
UBXN1-218ENST00000616865 TAS2R60P59551 318 aa10.77□□□□□ -0.69
UBXN1-218ENST00000616865 LGALS9CQ6DKI2 356 aa10.77□□□□□ -0.69
UBXN1-218ENST00000616865 IGF2BP2-AS1Q96M15 143 aa10.77□□□□□ -0.69
UBXN1-218ENST00000616865 SMDT1Q9H4I9 107 aa10.77□□□□□ -0.69
UBXN1-218ENST00000616865 IGHV3OR16-12A0A075B7B8 117 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 TRBV6-1A0A0K0K1D8 114 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 C7orf71A4D174 169 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 NDUFS6O75380 124 aaKnown RBP10.76□□□□□ -0.69
UBXN1-218ENST00000616865 IGLV2-11P01706 119 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 SRP19P09132 144 aaKnown RBP10.76□□□□□ -0.69
UBXN1-218ENST00000616865 CRISP2P16562 243 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 GNG4P50150 75 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 SMUG1Q53HV7 270 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 BAGE2Q86Y30 109 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
UBXN1-218ENST00000616865 NIPSNAP3BQ9BS92 247 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 DERL1Q9BUN8 251 aa10.76□□□□□ -0.69
UBXN1-218ENST00000616865 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 BTN1A1Q13410 526 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 CENPWQ5EE01 88 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 GFI1BQ5VTD9 330 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 COMMD7Q86VX2 200 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 C8orf49Q96NF6 230 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 PARLQ9H300 379 aa10.75□□□□□ -0.69
UBXN1-218ENST00000616865 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 KLLNB2CW77 178 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 LTAP01374 205 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 GIG44P09565 113 aaPredicted RBP10.74□□□□□ -0.69
UBXN1-218ENST00000616865 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
UBXN1-218ENST00000616865 ZFAND2AQ8N6M9 145 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 TVP23CQ96ET8 276 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 LINC01587Q99440 93 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 SMIM7Q9BQ49 75 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 C20orf144Q9BQM9 153 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 DNAH6Q9C0G6 4158 aa10.74□□□□□ -0.69
UBXN1-218ENST00000616865 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
UBXN1-218ENST00000616865 ZNF727A8MUV8 499 aa10.73□□□□□ -0.69
UBXN1-218ENST00000616865 CRXO43186 299 aaPredicted RBP10.73□□□□□ -0.69
UBXN1-218ENST00000616865 GCGP01275 180 aa10.73□□□□□ -0.69
UBXN1-218ENST00000616865 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
UBXN1-218ENST00000616865 KIR3DS1Q14943 382 aa10.73□□□□□ -0.69
UBXN1-218ENST00000616865 TMEM256Q8N2U0 113 aa10.73□□□□□ -0.69
UBXN1-218ENST00000616865 NHLRC2Q8NBF2 726 aa10.73□□□□□ -0.69
UBXN1-218ENST00000616865 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 HTN1P15515 57 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 FAM74A3Q4VXF1 159 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 SOHLH1Q5JUK2 328 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 PRR9Q5T870 116 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 UQCC3Q6UW78 93 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 OR11H2Q8NH07 326 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 BIN3Q9NQY0 253 aa10.72□□□□□ -0.69
UBXN1-218ENST00000616865 C9JQL5 133 aa10.71□□□□□ -0.69
UBXN1-218ENST00000616865 H7BYZ3 331 aa10.71□□□□□ -0.69
UBXN1-218ENST00000616865 PRR27Q6MZM9 219 aa10.71□□□□□ -0.69
UBXN1-218ENST00000616865 CSNK1G2-AS1Q8NCQ2 148 aa10.71□□□□□ -0.69
UBXN1-218ENST00000616865 C11orf68Q9H3H3 251 aaKnown RBP10.71□□□□□ -0.69
UBXN1-218ENST00000616865 NAGKQ9UJ70 344 aa10.71□□□□□ -0.69
UBXN1-218ENST00000616865 FABP5P3A8MUU1 101 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 C9JCJ5 164 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 SFTA3P0C7M3 94 aa10.7□□□□□ -0.7
UBXN1-218ENST00000616865 NANOS2P60321 138 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms