RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 ST6GAL2Q96JF0 529 aa11.96□□□□□ -0.49
LHX1-202ENST00000616237 GAGE12BA1L429 117 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 HMSDA8MTL9 139 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 SNURFLB1AK76 121 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 GGTLC3B5MD39 225 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 GAGE7O76087 117 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 CXorf1O96002 111 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 GAGE12FP0CL80 117 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 GAGE12GP0CL81 117 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 GAGE12IP0CL82 117 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 ZNF345Q14585 488 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 Q6ZTI0 123 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 KLF12Q9Y4X4 402 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 LENEPQ9Y5L5 61 aa11.95□□□□□ -0.5
LHX1-202ENST00000616237 IGHV1OR15-1A0A075B7D0 117 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 CTXND1A0A1B0GTU2 59 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 P0DMU3 169 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 FAM231AP0DMU4 169 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 FAM231CP0DMU5 169 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 Q6AWC8 147 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 ZNF680Q8NEM1 530 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 SGK494Q96LW2 274 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 TMPRSS5Q9H3S3 457 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 TMEM167BQ9NRX6 74 aa11.94□□□□□ -0.5
LHX1-202ENST00000616237 RGS13O14921 159 aa11.93□□□□□ -0.5
LHX1-202ENST00000616237 SUMO1P63165 101 aaKnown RBP11.93□□□□□ -0.5
LHX1-202ENST00000616237 MUC21Q5SSG8 566 aa11.93□□□□□ -0.5
LHX1-202ENST00000616237 POM121L12Q8N7R1 296 aa11.93□□□□□ -0.5
LHX1-202ENST00000616237 C5orf17Q8NAS9 161 aa11.93□□□□□ -0.5
LHX1-202ENST00000616237 ARPC5LQ9BPX5 153 aa11.93□□□□□ -0.5
LHX1-202ENST00000616237 TCRAP04437 139 aa11.92□□□□□ -0.5
LHX1-202ENST00000616237 HOXA5P20719 270 aa11.92□□□□□ -0.5
LHX1-202ENST00000616237 FGF8P55075 233 aaPredicted RBP11.92□□□□□ -0.5
LHX1-202ENST00000616237 TCL1AP56279 114 aa11.92□□□□□ -0.5
LHX1-202ENST00000616237 AKR1C8PQ5T2L2 129 aa11.92□□□□□ -0.5
LHX1-202ENST00000616237 IBA57Q5T440 356 aaKnown RBP11.92□□□□□ -0.5
LHX1-202ENST00000616237 SPINK4O60575 86 aa11.92□□□□□ -0.5
LHX1-202ENST00000616237 IGLV2-11P01706 119 aa11.92□□□□□ -0.5
LHX1-202ENST00000616237 IQCF2Q8IXL9 164 aa11.92□□□□□ -0.5
LHX1-202ENST00000616237 BIRC6Q9NR09 4857 aa11.91□□□□□ -0.5
LHX1-202ENST00000616237 F6UZH7 168 aa11.91□□□□□ -0.5
LHX1-202ENST00000616237 FHITP49789 147 aa11.91□□□□□ -0.5
LHX1-202ENST00000616237 C15orf53Q8NAA6 179 aa11.91□□□□□ -0.5
LHX1-202ENST00000616237 TREM1Q9NP99 234 aa11.91□□□□□ -0.5
LHX1-202ENST00000616237 MDFICQ9P1T7 246 aa11.91□□□□□ -0.5
LHX1-202ENST00000616237 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
LHX1-202ENST00000616237 FAT2Q9NYQ8 4349 aa11.9□□□□□ -0.5
LHX1-202ENST00000616237 TRGV1A0A0A0MS02 117 aa11.9□□□□□ -0.5
LHX1-202ENST00000616237 A0A0D9SG52 128 aa11.9□□□□□ -0.5
LHX1-202ENST00000616237 A0A1W2PRE2 83 aa11.9□□□□□ -0.5
LHX1-202ENST00000616237 C18orf15Q96N68 181 aa11.9□□□□□ -0.5
LHX1-202ENST00000616237 DNAH17Q9UFH2 4485 aa11.9□□□□□ -0.5
LHX1-202ENST00000616237 SERTM2A0A1B0GWG4 89 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 MAP1LC3B2A6NCE7 125 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 BCL2L11O43521 198 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 UBE2G2P60604 165 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 OR5I1Q13606 314 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 Q6ZNX1 250 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 MAP1LC3BQ9GZQ8 125 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 PSG8Q9UQ74 426 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 NACAE9PAV3 2078 aa11.89□□□□□ -0.51
LHX1-202ENST00000616237 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
LHX1-202ENST00000616237 NUDT3O95989 172 aa11.88□□□□□ -0.51
LHX1-202ENST00000616237 ZNF80P51504 273 aaPredicted RBP11.88□□□□□ -0.51
LHX1-202ENST00000616237 TDRG1Q3Y452 100 aa11.88□□□□□ -0.51
LHX1-202ENST00000616237 LINC00479Q96M42 142 aa11.88□□□□□ -0.51
LHX1-202ENST00000616237 ZNF471Q9BX82 626 aaPredicted RBP11.88□□□□□ -0.51
LHX1-202ENST00000616237 MRPL16Q9NX20 251 aaKnown RBP11.88□□□□□ -0.51
LHX1-202ENST00000616237 MUC4Q99102 2169 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 TRGV2A0A075B6R0 118 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 KANTRA0A1W2PQU2 76 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 FAM74A7A6NL05 159 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 SEC11BP0C7V7 166 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 ZNF415Q09FC8 603 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 RNF212Q495C1 297 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 FAM159AQ6UWV7 190 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 UBE2DNLQ8IWF7 75 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 TMEM183AQ8IXX5 376 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 CYB561D1Q8N8Q1 229 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
LHX1-202ENST00000616237 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 TRAV21A0A0B4J279 112 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 A0A0J9YY99 117 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 GNRH2O43555 120 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 FLI1Q01543 452 aaPredicted RBP11.86□□□□□ -0.51
LHX1-202ENST00000616237 LGALS9BQ3B8N2 356 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 PRNTQ86SH4 94 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 TMEM75Q8N9X5 138 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 C11orf21Q9P2W6 132 aa11.86□□□□□ -0.51
LHX1-202ENST00000616237 K7EQM0 130 aa11.85□□□□□ -0.51
LHX1-202ENST00000616237 M0R2N4 97 aa11.85□□□□□ -0.51
LHX1-202ENST00000616237 TCTE3Q8IZS6 198 aa11.85□□□□□ -0.51
LHX1-202ENST00000616237 VSIG2Q96IQ7 327 aa11.85□□□□□ -0.51
LHX1-202ENST00000616237 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
LHX1-202ENST00000616237 TRGV11A0A075B6L2 103 aa11.84□□□□□ -0.51
LHX1-202ENST00000616237 IGHV3-16A0A0C4DH30 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms