RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SSBP2P81877 361 aaPredicted RBP7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 C8orf49Q96NF6 230 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 DNAJC9-AS1A6NH13 148 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 INS-IGF2F8WCM5 200 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 ZNF726P1Q15940 193 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 TRPT1Q86TN4 253 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 DPM2O94777 84 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 IFI27L1Q96BM0 104 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 NOTCH3Q9UM47 2321 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 CGB3P0DN86 165 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 CGB7P0DN87 165 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 SEC11AP67812 179 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 LSM4Q9Y4Z0 139 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 ATRXP46100 2492 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 AZU1P20160 251 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 CSTL1Q9H114 145 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 H3BUT2 72 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 SPXQ9BT56 116 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 DYSFO75923 2080 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 TRAV12-2A0A075B6T6 113 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 TEX22C9J3V5 150 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 TYMSP04818 313 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 CTSGP08311 255 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 C5orf30Q96GV9 206 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 SRCAPQ6ZRS2 3230 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 IGKV3D-20A0A0C4DH25 116 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 PRSS46E5RG02 174 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 GP9P14770 177 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 ANXA2RQ3ZCQ2 193 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 LENEPQ9Y5L5 61 aa7.38□□□□□ -1.23
CLTCL1-208ENST00000615606 TNRC6AQ8NDV7 1962 aaKnown RBP7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 K7EMT4 169 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 IGKV1-17P01599 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 CSPG4Q6UVK1 2322 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 TMEM256Q8N2U0 113 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 C4orf3Q8WVX3 66 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 IGHV4OR15-8A0A075B7B6 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 A0A087WW49 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE12BA1L429 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE7O76087 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE12FP0CL80 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE12GP0CL81 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE12IP0CL82 117 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 FAM231DQ6ZW35 169 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 AMN1Q8IY45 258 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 OR2K2Q8NGT1 345 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 C11orf52Q96A22 123 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 NHP2Q9NX24 153 aaKnown RBP7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 RBAKDNA6NC62 111 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 DOCK11Q5JSL3 2073 aa7.37□□□□□ -1.23
CLTCL1-208ENST00000615606 PSCAO43653 123 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 MORN3Q6PF18 240 aaPredicted RBP7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 Q6YL49 198 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 GPHB5Q86YW7 130 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 TRAV25A0A0B4J276 109 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 CFHR3Q02985 330 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 HIST2H2BCQ6DN03 193 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 PHLDA1Q8WV24 401 aaPredicted RBP7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 TSPAN13O95857 204 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 IGLV2-14P01704 120 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 C16orf54Q6UWD8 224 aa7.36□□□□□ -1.23
CLTCL1-208ENST00000615606 PCNX3Q9H6A9 2034 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 IGKCP01834 107 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 SLAQ13239 276 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 PYGO2Q9BRQ0 406 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 C1orf159Q96HA4 380 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 DSCAMO60469 2012 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 NAV2Q8IVL1 2488 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE12JA6NER3 117 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 C2orf70A6NJV1 201 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE1Q13065 139 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE4Q13068 117 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE5Q13069 117 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 GAGE13Q4V321 117 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 C10orf126Q8N4M7 172 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 CYYR1Q96J86 154 aa7.35□□□□□ -1.23
CLTCL1-208ENST00000615606 ARFGEF3Q5TH69 2177 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 CKS1BP61024 79 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 SRSF2Q01130 221 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 SFTA2Q6UW10 78 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 CITED2Q99967 270 aaPredicted RBP7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 RBMY1BA6NDE4 496 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 RBMY1EA6NEQ0 496 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 BUB3O43684 328 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 NDUFS6O75380 124 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 RBMY1DP0C7P1 496 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 RBMY1A1P0DJD3 496 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 RBMY1CP0DJD4 496 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 SS18Q15532 418 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 RNF152Q8N8N0 203 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 C17orf77Q96MU5 243 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 AGPAT4-IT1Q9H0P7 198 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 TRBV7-9A0A0J9YWB2 115 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
CLTCL1-208ENST00000615606 INSL3P51460 131 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms